Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Snord19-201ENSMUST00000104609 76 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm37845-201ENSMUST00000194977 355 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.37□□□□□ -2.47
Trem1Q9JKE2 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Mir201-201ENSMUST00000083470 66 ntBASIC-0.38□□□□□ -2.47
Trem1Q9JKE2 Mir541-201ENSMUST00000102097 90 ntBASIC-0.39□□□□□ -2.47
Trem1Q9JKE2 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.39□□□□□ -2.47
Trem1Q9JKE2 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.39□□□□□ -2.47
Trem1Q9JKE2 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.39□□□□□ -2.47
Trem1Q9JKE2 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.39□□□□□ -2.47
Trem1Q9JKE2 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.4□□□□□ -2.47
Trem1Q9JKE2 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.41□□□□□ -2.48
Trem1Q9JKE2 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.41□□□□□ -2.48
Trem1Q9JKE2 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.41□□□□□ -2.48
Trem1Q9JKE2 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.41□□□□□ -2.48
Trem1Q9JKE2 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.41□□□□□ -2.48
Trem1Q9JKE2 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Mir327-201ENSMUST00000199328 69 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Gm23679-201ENSMUST00000083161 119 ntBASIC-0.42□□□□□ -2.48
Trem1Q9JKE2 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.43□□□□□ -2.48
Trem1Q9JKE2 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Mir363-201ENSMUST00000093598 75 ntBASIC-0.44□□□□□ -2.48
Trem1Q9JKE2 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.45□□□□□ -2.48
Trem1Q9JKE2 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.46□□□□□ -2.48
Trem1Q9JKE2 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.47□□□□□ -2.48
Trem1Q9JKE2 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.48□□□□□ -2.49
Trem1Q9JKE2 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.48□□□□□ -2.49
Trem1Q9JKE2 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.48□□□□□ -2.49
Trem1Q9JKE2 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 264.9 ms