Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm22557-201ENSMUST00000157804 102 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm44687-201ENSMUST00000204975 235 ntBASIC-1.16□□□□□ -2.6
Trem3Q9JKE1 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.17□□□□□ -2.6
Trem3Q9JKE1 Gm12924-201ENSMUST00000121747 318 ntBASIC-1.17□□□□□ -2.6
Trem3Q9JKE1 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.17□□□□□ -2.6
Trem3Q9JKE1 Gm26287-201ENSMUST00000158887 81 ntBASIC-1.17□□□□□ -2.6
Trem3Q9JKE1 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.17□□□□□ -2.6
Trem3Q9JKE1 Gm25414-201ENSMUST00000101814 107 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm11204-201ENSMUST00000122438 147 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm38280-201ENSMUST00000192610 158 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Mir489-201ENSMUST00000093599 107 ntBASIC-1.18□□□□□ -2.6
Trem3Q9JKE1 Gm23219-201ENSMUST00000158123 87 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Gm22675-201ENSMUST00000158430 104 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Mir7093-201ENSMUST00000184195 101 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1.19□□□□□ -2.6
Trem3Q9JKE1 Mir574-201ENSMUST00000103854 78 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Gm28008-201ENSMUST00000184021 186 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Gm45005-201ENSMUST00000206640 157 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 AC154552.1-201ENSMUST00000222969 202 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Gm23242-201ENSMUST00000083055 107 ntBASIC-1.2□□□□□ -2.6
Trem3Q9JKE1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.21□□□□□ -2.6
Trem3Q9JKE1 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.21□□□□□ -2.6
Trem3Q9JKE1 AC192091.2-201ENSMUST00000217869 117 ntBASIC-1.21□□□□□ -2.6
Trem3Q9JKE1 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.22□□□□□ -2.6
Trem3Q9JKE1 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.22□□□□□ -2.6
Trem3Q9JKE1 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.22□□□□□ -2.6
Trem3Q9JKE1 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-1.22□□□□□ -2.6
Trem3Q9JKE1 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.22□□□□□ -2.6
Trem3Q9JKE1 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm22555-201ENSMUST00000157801 62 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Snora26-201ENSMUST00000175614 121 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 AC154296.2-201ENSMUST00000214696 545 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.23□□□□□ -2.61
Trem3Q9JKE1 Gm24423-201ENSMUST00000101982 106 ntBASIC-1.24□□□□□ -2.61
Trem3Q9JKE1 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.24□□□□□ -2.61
Trem3Q9JKE1 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.24□□□□□ -2.61
Trem3Q9JKE1 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.24□□□□□ -2.61
Trem3Q9JKE1 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.24□□□□□ -2.61
Trem3Q9JKE1 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Gm27446-201ENSMUST00000183963 89 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Mir186-201ENSMUST00000083497 71 ntBASIC-1.25□□□□□ -2.61
Trem3Q9JKE1 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.26□□□□□ -2.61
Trem3Q9JKE1 n-R5s87-201ENSMUST00000122752 116 ntBASIC-1.26□□□□□ -2.61
Trem3Q9JKE1 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.26□□□□□ -2.61
Trem3Q9JKE1 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.26□□□□□ -2.61
Trem3Q9JKE1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-1.26□□□□□ -2.61
Trem3Q9JKE1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Gm23059-201ENSMUST00000158978 107 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Mir5624-201ENSMUST00000176635 61 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 AC154213.2-201ENSMUST00000227138 187 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-1.27□□□□□ -2.61
Trem3Q9JKE1 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.28□□□□□ -2.61
Trem3Q9JKE1 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.29□□□□□ -2.62
Trem3Q9JKE1 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.29□□□□□ -2.62
Trem3Q9JKE1 AC124687.1-201ENSMUST00000221868 189 ntBASIC-1.29□□□□□ -2.62
Trem3Q9JKE1 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.29□□□□□ -2.62
Trem3Q9JKE1 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.29□□□□□ -2.62
Trem3Q9JKE1 Snord2-201ENSMUST00000157899 69 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm27585-201ENSMUST00000183717 199 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 AC134601.1-201ENSMUST00000221058 109 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.3□□□□□ -2.62
Trem3Q9JKE1 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.31□□□□□ -2.62
Trem3Q9JKE1 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.31□□□□□ -2.62
Trem3Q9JKE1 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.31□□□□□ -2.62
Trem3Q9JKE1 Gm22946-201ENSMUST00000158558 82 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms