Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mir6386-201ENSMUST00000183558 104 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Gm28256-201ENSMUST00000188953 139 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Gm28559-201ENSMUST00000190532 139 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Mir509-201ENSMUST00000196089 75 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ube3bQ9ES34 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.66□□□□□ -1.98
Ube3bQ9ES34 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Ube3bQ9ES34 Gm26280-201ENSMUST00000157096 101 ntBASIC2.65□□□□□ -1.99
Ube3bQ9ES34 Gm22011-201ENSMUST00000158790 123 ntBASIC2.65□□□□□ -1.99
Ube3bQ9ES34 Gm22413-201ENSMUST00000175465 85 ntBASIC2.65□□□□□ -1.99
Ube3bQ9ES34 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ube3bQ9ES34 Gm24049-201ENSMUST00000102409 100 ntBASIC2.64□□□□□ -1.99
Ube3bQ9ES34 Gm43722-201ENSMUST00000196054 124 ntBASIC2.64□□□□□ -1.99
Ube3bQ9ES34 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.64□□□□□ -1.99
Ube3bQ9ES34 Gm25756-201ENSMUST00000103990 136 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Gm25619-201ENSMUST00000122621 104 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Gm22947-201ENSMUST00000158559 91 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Gm22944-201ENSMUST00000158662 133 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Gm26359-201ENSMUST00000158873 101 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.63□□□□□ -1.99
Ube3bQ9ES34 Gm5581-201ENSMUST00000072940 2550 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm24769-201ENSMUST00000158506 129 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm22200-201ENSMUST00000158614 67 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm25838-201ENSMUST00000158920 120 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm22093-201ENSMUST00000158980 111 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Mir3069-201ENSMUST00000198802 65 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm43927-201ENSMUST00000204599 117 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Gm24311-201ENSMUST00000082570 104 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ube3bQ9ES34 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.62□□□□□ -1.99
Ube3bQ9ES34 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Ube3bQ9ES34 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ube3bQ9ES34 Gm26473-201ENSMUST00000116763 127 ntBASIC2.61□□□□□ -1.99
Ube3bQ9ES34 Gm24475-201ENSMUST00000157435 143 ntBASIC2.61□□□□□ -1.99
Ube3bQ9ES34 Gm22159-201ENSMUST00000158412 130 ntBASIC2.61□□□□□ -1.99
Ube3bQ9ES34 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ube3bQ9ES34 Gm25945-201ENSMUST00000122484 135 ntBASIC2.6□□□□□ -1.99
Ube3bQ9ES34 Gm28767-201ENSMUST00000188601 114 ntBASIC2.6□□□□□ -1.99
Ube3bQ9ES34 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.6□□□□□ -1.99
Ube3bQ9ES34 Gm11857-201ENSMUST00000119817 324 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Gm15536-201ENSMUST00000121411 114 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Mir1899-201ENSMUST00000122798 96 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Gm22078-201ENSMUST00000157593 103 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Gm24237-201ENSMUST00000157790 132 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Gm24900-201ENSMUST00000158128 134 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Gm25629-201ENSMUST00000084001 107 ntBASIC2.59□□□□□ -1.99
Ube3bQ9ES34 Mir542-201ENSMUST00000102186 85 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm22544-201ENSMUST00000104349 127 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm24648-201ENSMUST00000157111 132 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm25622-201ENSMUST00000157217 104 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm26029-201ENSMUST00000158659 132 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm24366-201ENSMUST00000175383 86 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Gm24201-201ENSMUST00000082946 125 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Mir494-201ENSMUST00000093632 85 ntBASIC2.58□□□□□ -2
Ube3bQ9ES34 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ube3bQ9ES34 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Ube3bQ9ES34 Gm22486-201ENSMUST00000116815 137 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Gm23170-201ENSMUST00000157158 106 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Gm24547-201ENSMUST00000158649 149 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Mir6419-201ENSMUST00000184784 113 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Gm38295-201ENSMUST00000191951 151 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Gm22753-201ENSMUST00000083657 107 ntBASIC2.57□□□□□ -2
Ube3bQ9ES34 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ube3bQ9ES34 Gm16510-201ENSMUST00000153501 249 ntBASIC2.56□□□□□ -2
Ube3bQ9ES34 Gm23208-201ENSMUST00000158666 127 ntBASIC2.56□□□□□ -2
Ube3bQ9ES34 Gm3724-201ENSMUST00000197957 349 ntBASIC2.56□□□□□ -2
Ube3bQ9ES34 Gm25788-201ENSMUST00000082721 131 ntBASIC2.56□□□□□ -2
Ube3bQ9ES34 Gm22666-201ENSMUST00000158717 164 ntBASIC2.55□□□□□ -2
Ube3bQ9ES34 Mir7241-201ENSMUST00000184532 64 ntBASIC2.55□□□□□ -2
Ube3bQ9ES34 Gm27959-201ENSMUST00000185172 111 ntBASIC2.55□□□□□ -2
Ube3bQ9ES34 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.55□□□□□ -2
Ube3bQ9ES34 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ube3bQ9ES34 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ube3bQ9ES34 Gm22151-201ENSMUST00000116963 58 ntBASIC2.54□□□□□ -2
Ube3bQ9ES34 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ube3bQ9ES34 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ube3bQ9ES34 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.53□□□□□ -2
Ube3bQ9ES34 Gm26257-201ENSMUST00000122500 107 ntBASIC2.53□□□□□ -2
Ube3bQ9ES34 Gm22083-201ENSMUST00000157586 102 ntBASIC2.53□□□□□ -2
Ube3bQ9ES34 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.53□□□□□ -2
Ube3bQ9ES34 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Gm24098-201ENSMUST00000102075 109 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Gm25381-201ENSMUST00000102078 109 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Gm23661-201ENSMUST00000122630 87 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Gm22039-201ENSMUST00000157278 132 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Mir126a-201ENSMUST00000083606 73 ntBASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ube3bQ9ES34 Gm25991-201ENSMUST00000102439 99 ntBASIC2.5□□□□□ -2.01
Ube3bQ9ES34 Gm12469-201ENSMUST00000117623 207 ntBASIC2.5□□□□□ -2.01
Ube3bQ9ES34 Gm25183-201ENSMUST00000157752 106 ntBASIC2.5□□□□□ -2.01
Ube3bQ9ES34 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.5□□□□□ -2.01
Ube3bQ9ES34 Gm23649-201ENSMUST00000179007 107 ntBASIC2.5□□□□□ -2.01
Ube3bQ9ES34 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms