Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm24030-201ENSMUST00000083931 164 ntBASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm6272-201ENSMUST00000121256 171 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm25060-201ENSMUST00000157374 130 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm24001-201ENSMUST00000158463 85 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm25161-201ENSMUST00000158913 132 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Mir695-201ENSMUST00000102261 109 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm26091-201ENSMUST00000122704 82 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm26412-201ENSMUST00000157666 55 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22966-201ENSMUST00000157957 129 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Mir7079-201ENSMUST00000184697 69 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22753-201ENSMUST00000083657 107 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Mir1899-201ENSMUST00000122798 96 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm25329-201ENSMUST00000158041 126 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm17528-201ENSMUST00000171026 239 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm42935-201ENSMUST00000202004 151 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm20734-201ENSMUST00000216939 193 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Snord60-201ENSMUST00000082834 78 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Snord69-201ENSMUST00000104024 80 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm23260-201ENSMUST00000158317 172 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm27993-201ENSMUST00000184362 85 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm44470-201ENSMUST00000203913 142 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm23239-201ENSMUST00000083006 181 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm15289-201ENSMUST00000117793 244 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm22286-201ENSMUST00000179708 107 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Mir362-201ENSMUST00000093592 65 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm25416-201ENSMUST00000104221 107 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm24717-201ENSMUST00000157522 124 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22775-201ENSMUST00000177630 120 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm23569-201ENSMUST00000180120 120 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm45492-201ENSMUST00000211611 288 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm23301-201ENSMUST00000082713 65 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22681-201ENSMUST00000083853 106 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22349-201ENSMUST00000157864 107 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm26291-201ENSMUST00000158889 137 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Mir669j-201ENSMUST00000179023 121 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm44859-201ENSMUST00000207831 94 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm23881-201ENSMUST00000116872 66 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm23783-201ENSMUST00000157941 102 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm26337-201ENSMUST00000178000 79 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm26398-201ENSMUST00000179015 127 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm37330-201ENSMUST00000192606 153 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Trbv25-201ENSMUST00000194700 273 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm44469-201ENSMUST00000198558 79 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm23578-201ENSMUST00000103943 104 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Mir1191-201ENSMUST00000116883 120 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm25367-201ENSMUST00000158846 106 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm22451-201ENSMUST00000122803 151 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm22340-201ENSMUST00000157717 114 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm23126-201ENSMUST00000104260 134 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm22336-201ENSMUST00000157719 107 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm24223-201ENSMUST00000158827 90 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm12469-201ENSMUST00000117623 207 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 168.8 ms