Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.32□□□□□ -2.46
Lima1Q9ERG0 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.33□□□□□ -2.46
Lima1Q9ERG0 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.33□□□□□ -2.46
Lima1Q9ERG0 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.33□□□□□ -2.46
Lima1Q9ERG0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.33□□□□□ -2.46
Lima1Q9ERG0 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Mir881-201ENSMUST00000104844 78 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Mir489-201ENSMUST00000093599 107 ntBASIC-0.34□□□□□ -2.46
Lima1Q9ERG0 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.36□□□□□ -2.47
Lima1Q9ERG0 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.36□□□□□ -2.47
Lima1Q9ERG0 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.36□□□□□ -2.47
Lima1Q9ERG0 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.36□□□□□ -2.47
Lima1Q9ERG0 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.36□□□□□ -2.47
Lima1Q9ERG0 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Lima1Q9ERG0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.38□□□□□ -2.47
Lima1Q9ERG0 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Snord19-201ENSMUST00000104609 76 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm37845-201ENSMUST00000194977 355 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.39□□□□□ -2.47
Lima1Q9ERG0 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.4□□□□□ -2.47
Lima1Q9ERG0 Mir541-201ENSMUST00000102097 90 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Mir201-201ENSMUST00000083470 66 ntBASIC-0.41□□□□□ -2.48
Lima1Q9ERG0 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.42□□□□□ -2.48
Lima1Q9ERG0 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.42□□□□□ -2.48
Lima1Q9ERG0 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.42□□□□□ -2.48
Lima1Q9ERG0 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.43□□□□□ -2.48
Lima1Q9ERG0 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Mir327-201ENSMUST00000199328 69 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.44□□□□□ -2.48
Lima1Q9ERG0 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 Gm23679-201ENSMUST00000083161 119 ntBASIC-0.45□□□□□ -2.48
Lima1Q9ERG0 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.46□□□□□ -2.48
Lima1Q9ERG0 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 173.3 ms