Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm25985-201ENSMUST00000122677 107 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm24250-201ENSMUST00000157320 135 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22079-201ENSMUST00000157592 106 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22989-201ENSMUST00000158313 86 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Mir6369-201ENSMUST00000183772 106 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm42795-201ENSMUST00000198847 76 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Scn4aQ9ER60 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Scn4aQ9ER60 Gm22652-201ENSMUST00000083207 131 ntBASIC0.18□□□□□ -2.38
Scn4aQ9ER60 Gm25894-201ENSMUST00000083458 75 ntBASIC0.18□□□□□ -2.38
Scn4aQ9ER60 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.18□□□□□ -2.38
Scn4aQ9ER60 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.18□□□□□ -2.38
Scn4aQ9ER60 Gm44328-201ENSMUST00000199331 75 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Gm5002-201ENSMUST00000207145 223 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Mir488-201ENSMUST00000093595 109 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Gm23545-201ENSMUST00000158205 104 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Gm44457-201ENSMUST00000198109 76 ntBASIC0.17□□□□□ -2.38
Scn4aQ9ER60 Gm26420-201ENSMUST00000104273 103 ntBASIC0.16□□□□□ -2.38
Scn4aQ9ER60 Gm24509-201ENSMUST00000157086 101 ntBASIC0.16□□□□□ -2.38
Scn4aQ9ER60 Gm25358-201ENSMUST00000157189 101 ntBASIC0.16□□□□□ -2.38
Scn4aQ9ER60 Gm45541-201ENSMUST00000210443 54 ntBASIC0.16□□□□□ -2.38
Scn4aQ9ER60 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.16□□□□□ -2.38
Scn4aQ9ER60 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.16□□□□□ -2.38
Scn4aQ9ER60 Gm24796-201ENSMUST00000104007 107 ntBASIC0.15□□□□□ -2.38
Scn4aQ9ER60 Gm23901-201ENSMUST00000157570 107 ntBASIC0.15□□□□□ -2.38
Scn4aQ9ER60 Gm26158-201ENSMUST00000158973 119 ntBASIC0.15□□□□□ -2.38
Scn4aQ9ER60 Gm22951-201ENSMUST00000179471 107 ntBASIC0.15□□□□□ -2.38
Scn4aQ9ER60 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.15□□□□□ -2.38
Scn4aQ9ER60 Gm24132-201ENSMUST00000104745 91 ntBASIC0.15□□□□□ -2.39
Scn4aQ9ER60 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.15□□□□□ -2.39
Scn4aQ9ER60 Gm17528-201ENSMUST00000171026 239 ntBASIC0.14□□□□□ -2.39
Scn4aQ9ER60 Gm28767-201ENSMUST00000188601 114 ntBASIC0.14□□□□□ -2.39
Scn4aQ9ER60 Gm37624-201ENSMUST00000193751 219 ntBASIC0.14□□□□□ -2.39
Scn4aQ9ER60 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.14□□□□□ -2.39
Scn4aQ9ER60 Gm26204-201ENSMUST00000082906 107 ntBASIC0.14□□□□□ -2.39
Scn4aQ9ER60 Gm22520-201ENSMUST00000158269 129 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm24129-201ENSMUST00000158537 97 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Trbv25-201ENSMUST00000194700 273 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Mir376b-201ENSMUST00000195930 82 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm22287-201ENSMUST00000083197 107 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm24030-201ENSMUST00000083931 164 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm22030-201ENSMUST00000116942 63 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm25390-201ENSMUST00000157341 103 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm22967-201ENSMUST00000157956 239 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm23763-201ENSMUST00000158345 60 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm25015-201ENSMUST00000158400 128 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm27332-201ENSMUST00000184893 112 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Mir201-201ENSMUST00000083470 66 ntBASIC0.13□□□□□ -2.39
Scn4aQ9ER60 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Scn4aQ9ER60 Gm44469-201ENSMUST00000198558 79 ntBASIC0.12□□□□□ -2.39
Scn4aQ9ER60 Gm45374-201ENSMUST00000211388 136 ntBASIC0.12□□□□□ -2.39
Scn4aQ9ER60 Gm23772-201ENSMUST00000104433 102 ntBASIC0.11□□□□□ -2.39
Scn4aQ9ER60 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.11□□□□□ -2.39
Scn4aQ9ER60 Mir471-201ENSMUST00000093596 67 ntBASIC0.11□□□□□ -2.39
Scn4aQ9ER60 Gm22148-201ENSMUST00000104445 107 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm25600-201ENSMUST00000158357 106 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm23859-201ENSMUST00000158383 64 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm25834-201ENSMUST00000158916 101 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm42935-201ENSMUST00000202004 151 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm26202-201ENSMUST00000082910 65 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm22744-201ENSMUST00000083444 65 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm24640-201ENSMUST00000116949 126 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm22626-201ENSMUST00000116990 126 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm27579-201ENSMUST00000158113 63 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm24762-201ENSMUST00000083689 104 ntBASIC0.1□□□□□ -2.39
Scn4aQ9ER60 Gm24468-201ENSMUST00000104489 104 ntBASIC0.09□□□□□ -2.39
Scn4aQ9ER60 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.09□□□□□ -2.39
Scn4aQ9ER60 Mir7229-201ENSMUST00000197062 53 ntBASIC0.09□□□□□ -2.39
Scn4aQ9ER60 Gm24047-201ENSMUST00000102405 104 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm24587-201ENSMUST00000116697 89 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm44455-201ENSMUST00000200061 82 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm23970-201ENSMUST00000083319 107 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm22373-201ENSMUST00000104584 89 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Gm43381-201ENSMUST00000198553 165 ntBASIC0.08□□□□□ -2.4
Scn4aQ9ER60 Scarna9-201ENSMUST00000104318 70 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Gm26011-201ENSMUST00000104410 104 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Mir1191-201ENSMUST00000116883 120 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Gm29535-201ENSMUST00000185723 109 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Gm28143-201ENSMUST00000191082 109 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Gm24522-201ENSMUST00000083964 108 ntBASIC0.07□□□□□ -2.4
Scn4aQ9ER60 Mir574-201ENSMUST00000103854 78 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Gm25693-201ENSMUST00000175443 85 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Gm24575-201ENSMUST00000175502 77 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Gm27285-201ENSMUST00000183875 127 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Mir1298-201ENSMUST00000116681 98 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Gm28001-201ENSMUST00000183561 117 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.06□□□□□ -2.4
Scn4aQ9ER60 Gm27465-201ENSMUST00000184290 91 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Snord80-202ENSMUST00000199023 77 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Mir1949-202ENSMUST00000199259 70 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms