Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Gm11248-201ENSMUST00000119568 201 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm15654-201ENSMUST00000152660 300 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm25889-201ENSMUST00000157775 107 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm25329-201ENSMUST00000158041 126 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm23838-201ENSMUST00000158067 162 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm23636-201ENSMUST00000175070 95 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm20118-201ENSMUST00000187207 162 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm42935-201ENSMUST00000202004 151 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm25650-201ENSMUST00000083784 162 ntBASIC1.86□□□□□ -2.11
Upf1Q9EPU0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.85□□□□□ -2.11
Upf1Q9EPU0 Gm22785-201ENSMUST00000104087 132 ntBASIC1.85□□□□□ -2.11
Upf1Q9EPU0 Gm24783-201ENSMUST00000157639 100 ntBASIC1.85□□□□□ -2.11
Upf1Q9EPU0 Gm45429-201ENSMUST00000209527 172 ntBASIC1.85□□□□□ -2.11
Upf1Q9EPU0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Upf1Q9EPU0 Mir20b-201ENSMUST00000102087 80 ntBASIC1.84□□□□□ -2.11
Upf1Q9EPU0 Gm22638-201ENSMUST00000179674 107 ntBASIC1.84□□□□□ -2.11
Upf1Q9EPU0 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.84□□□□□ -2.11
Upf1Q9EPU0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Gm12086-201ENSMUST00000120863 228 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Gm23644-201ENSMUST00000157856 77 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Gm28270-201ENSMUST00000188550 109 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Gm28328-201ENSMUST00000188869 109 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.83□□□□□ -2.12
Upf1Q9EPU0 Mir653-201ENSMUST00000102402 85 ntBASIC1.82□□□□□ -2.12
Upf1Q9EPU0 Gm22490-201ENSMUST00000157188 119 ntBASIC1.82□□□□□ -2.12
Upf1Q9EPU0 Gm24262-201ENSMUST00000157431 144 ntBASIC1.82□□□□□ -2.12
Upf1Q9EPU0 Gm22070-201ENSMUST00000178475 107 ntBASIC1.82□□□□□ -2.12
Upf1Q9EPU0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.82□□□□□ -2.12
Upf1Q9EPU0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.81□□□□□ -2.12
Upf1Q9EPU0 Gm14039-201ENSMUST00000118705 101 ntBASIC1.81□□□□□ -2.12
Upf1Q9EPU0 Gm25663-201ENSMUST00000157698 135 ntBASIC1.81□□□□□ -2.12
Upf1Q9EPU0 Mir532-201ENSMUST00000093630 96 ntBASIC1.81□□□□□ -2.12
Upf1Q9EPU0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Upf1Q9EPU0 Gm22772-201ENSMUST00000104451 121 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm25544-201ENSMUST00000122676 120 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm23601-201ENSMUST00000157259 131 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm25715-201ENSMUST00000158627 125 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Mir6950-201ENSMUST00000184438 73 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm22809-201ENSMUST00000082743 156 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.8□□□□□ -2.12
Upf1Q9EPU0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.79□□□□□ -2.12
Upf1Q9EPU0 Gm24649-201ENSMUST00000157106 134 ntBASIC1.79□□□□□ -2.12
Upf1Q9EPU0 Mir6369-201ENSMUST00000183772 106 ntBASIC1.79□□□□□ -2.12
Upf1Q9EPU0 Gm23507-201ENSMUST00000083078 107 ntBASIC1.79□□□□□ -2.12
Upf1Q9EPU0 Gm22004-201ENSMUST00000101884 107 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Gm24588-201ENSMUST00000116696 83 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Gm24915-201ENSMUST00000157288 78 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Gm16307-201ENSMUST00000161269 210 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Mir30f-201ENSMUST00000196073 92 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.78□□□□□ -2.12
Upf1Q9EPU0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
Upf1Q9EPU0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Mir21c-201ENSMUST00000184910 78 ntBASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Upf1Q9EPU0 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm23197-201ENSMUST00000158809 112 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm25380-201ENSMUST00000175463 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm24641-201ENSMUST00000178055 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm25484-201ENSMUST00000178217 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm26138-201ENSMUST00000179236 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm22821-201ENSMUST00000179288 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm43324-201ENSMUST00000197482 289 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm23298-201ENSMUST00000083181 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm24614-201ENSMUST00000083269 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm22057-201ENSMUST00000083387 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm25516-201ENSMUST00000083857 107 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Snora2b-201ENSMUST00000084005 137 ntBASIC1.76□□□□□ -2.13
Upf1Q9EPU0 Gm24468-201ENSMUST00000104489 104 ntBASIC1.75□□□□□ -2.13
Upf1Q9EPU0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.75□□□□□ -2.13
Upf1Q9EPU0 Gm28767-201ENSMUST00000188601 114 ntBASIC1.75□□□□□ -2.13
Upf1Q9EPU0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Upf1Q9EPU0 Snord78-201ENSMUST00000104032 66 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Gm26081-201ENSMUST00000104068 132 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Mir3096-201ENSMUST00000116685 71 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Gm24947-201ENSMUST00000158334 110 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Gm26398-201ENSMUST00000179015 127 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Mir7663-201ENSMUST00000183950 61 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.74□□□□□ -2.13
Upf1Q9EPU0 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.74□□□□□ -2.13
Upf1Q9EPU0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 270.8 ms