Protein–RNA interactions for Protein: Q9DAL3

Ccdc54, Coiled-coil domain-containing protein 54, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54Q9DAL3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm23509-201ENSMUST00000083080 160 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm22673-201ENSMUST00000104415 131 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Snord90-201ENSMUST00000104568 111 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Gm22105-201ENSMUST00000116734 116 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Gm23253-201ENSMUST00000157441 104 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Mir100-201ENSMUST00000175270 80 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Gm44469-201ENSMUST00000198558 79 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Gm22973-201ENSMUST00000083298 191 ntBASIC0.36□□□□□ -2.35
Ccdc54Q9DAL3 Mir669j-201ENSMUST00000179023 121 ntBASIC0.35□□□□□ -2.35
Ccdc54Q9DAL3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.35□□□□□ -2.35
Ccdc54Q9DAL3 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.35□□□□□ -2.35
Ccdc54Q9DAL3 Gm26379-202ENSMUST00000200225 132 ntBASIC0.34□□□□□ -2.36
Ccdc54Q9DAL3 Gm43944-201ENSMUST00000205220 120 ntBASIC0.34□□□□□ -2.36
Ccdc54Q9DAL3 Mir10b-201ENSMUST00000083566 68 ntBASIC0.34□□□□□ -2.36
Ccdc54Q9DAL3 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Mir669b-201ENSMUST00000102172 97 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Gm25170-201ENSMUST00000104191 129 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Mir1191-201ENSMUST00000116883 120 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Gm12469-201ENSMUST00000117623 207 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.33□□□□□ -2.36
Ccdc54Q9DAL3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Snord72-201ENSMUST00000104549 81 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm22030-201ENSMUST00000116942 63 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm37545-201ENSMUST00000186512 148 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm42506-201ENSMUST00000202009 150 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm25894-201ENSMUST00000083458 75 ntBASIC0.32□□□□□ -2.36
Ccdc54Q9DAL3 Gm24374-201ENSMUST00000104394 106 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Gm25600-201ENSMUST00000158357 106 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Gm24106-201ENSMUST00000175498 127 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.31□□□□□ -2.36
Ccdc54Q9DAL3 Mir670-201ENSMUST00000102380 100 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm25274-201ENSMUST00000104296 135 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm26091-201ENSMUST00000122704 82 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm24223-201ENSMUST00000158827 90 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm25899-201ENSMUST00000082672 141 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm25401-201ENSMUST00000082975 106 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Mir448-201ENSMUST00000083516 112 ntBASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
Ccdc54Q9DAL3 Gm25974-201ENSMUST00000158701 94 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Gm26290-201ENSMUST00000158891 145 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Gm29535-201ENSMUST00000185723 109 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Gm28143-201ENSMUST00000191082 109 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Mir1949-202ENSMUST00000199259 70 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Gm23301-201ENSMUST00000082713 65 ntBASIC0.29□□□□□ -2.36
Ccdc54Q9DAL3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.28□□□□□ -2.36
Ccdc54Q9DAL3 Gm24717-201ENSMUST00000157522 124 ntBASIC0.28□□□□□ -2.36
Ccdc54Q9DAL3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.28□□□□□ -2.36
Ccdc54Q9DAL3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm27668-201ENSMUST00000184188 120 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm44602-201ENSMUST00000205948 132 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm25081-201ENSMUST00000082534 108 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.27□□□□□ -2.37
Ccdc54Q9DAL3 Mir216b-201ENSMUST00000102363 86 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm24379-201ENSMUST00000122695 86 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm24290-201ENSMUST00000157634 96 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm22541-201ENSMUST00000158165 127 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm23260-201ENSMUST00000158317 172 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm25693-201ENSMUST00000175443 85 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Mir6394-201ENSMUST00000184738 99 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm44458-201ENSMUST00000196594 143 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Mir7229-201ENSMUST00000197062 53 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm44457-201ENSMUST00000198109 76 ntBASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ccdc54Q9DAL3 Gm26011-201ENSMUST00000104410 104 ntBASIC0.25□□□□□ -2.37
Ccdc54Q9DAL3 Gm26398-201ENSMUST00000179015 127 ntBASIC0.25□□□□□ -2.37
Ccdc54Q9DAL3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms