Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.49□□□□□ -2.33
Rsph3bQ9DA80 Gm22373-201ENSMUST00000104584 89 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Gm25787-201ENSMUST00000104709 92 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Gm6985-201ENSMUST00000121255 271 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Mir1899-201ENSMUST00000122798 96 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Gm24054-201ENSMUST00000158619 105 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Gm37545-201ENSMUST00000186512 148 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Gm25136-201ENSMUST00000083253 115 ntBASIC0.48□□□□□ -2.33
Rsph3bQ9DA80 Mir20b-201ENSMUST00000102087 80 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm44489-201ENSMUST00000104619 97 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm15289-201ENSMUST00000117793 244 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm11644-201ENSMUST00000119735 150 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Mir3094-201ENSMUST00000175121 64 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm27289-201ENSMUST00000183341 82 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm27993-201ENSMUST00000184362 85 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm37330-201ENSMUST00000192606 153 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm23303-201ENSMUST00000082714 152 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Snord60-201ENSMUST00000082834 78 ntBASIC0.47□□□□□ -2.33
Rsph3bQ9DA80 Gm23989-201ENSMUST00000117030 66 ntBASIC0.46□□□□□ -2.34
Rsph3bQ9DA80 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
Rsph3bQ9DA80 Snord90-201ENSMUST00000104568 111 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm23881-201ENSMUST00000116872 66 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm25329-201ENSMUST00000158041 126 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm24500-201ENSMUST00000158447 124 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm24106-201ENSMUST00000175498 127 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm23301-201ENSMUST00000082713 65 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm10172-201ENSMUST00000085929 558 ntBASIC0.45□□□□□ -2.34
Rsph3bQ9DA80 Gm25633-201ENSMUST00000178565 107 ntBASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm23445-201ENSMUST00000082800 107 ntBASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Gm23947-201ENSMUST00000093636 107 ntBASIC0.44□□□□□ -2.34
Rsph3bQ9DA80 Snord72-201ENSMUST00000104549 81 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm10548-202ENSMUST00000165672 272 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Mir100-201ENSMUST00000175270 80 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm25300-201ENSMUST00000175284 84 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Mir7010-201ENSMUST00000183464 63 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm44469-201ENSMUST00000198558 79 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm44828-201ENSMUST00000203745 106 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm23509-201ENSMUST00000083080 160 ntBASIC0.43□□□□□ -2.34
Rsph3bQ9DA80 Gm14884-201ENSMUST00000120456 196 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Gm26158-201ENSMUST00000158973 119 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Mir6389-201ENSMUST00000183661 102 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Trbv25-201ENSMUST00000194700 273 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Gm42935-201ENSMUST00000202004 151 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Gm25401-201ENSMUST00000082975 106 ntBASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Rsph3bQ9DA80 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Rsph3bQ9DA80 Gm24555-201ENSMUST00000104548 124 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Mir1191-201ENSMUST00000116883 120 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Gm23857-201ENSMUST00000158379 111 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Gm24772-201ENSMUST00000158507 110 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Gm23917-201ENSMUST00000175256 98 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Gm25797-201ENSMUST00000082640 107 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Gm23969-201ENSMUST00000083324 74 ntBASIC0.4□□□□□ -2.35
Rsph3bQ9DA80 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Rsph3bQ9DA80 Gm12469-201ENSMUST00000117623 207 ntBASIC0.39□□□□□ -2.35
Rsph3bQ9DA80 Gm23253-201ENSMUST00000157441 104 ntBASIC0.39□□□□□ -2.35
Rsph3bQ9DA80 Gm18502-201ENSMUST00000218679 199 ntBASIC0.39□□□□□ -2.35
Rsph3bQ9DA80 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Rsph3bQ9DA80 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 Gm26011-201ENSMUST00000104410 104 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 Gm24963-201ENSMUST00000157916 144 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 Gm23504-201ENSMUST00000158988 95 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 Gm24461-201ENSMUST00000082735 103 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 Mir377-201ENSMUST00000083504 68 ntBASIC0.38□□□□□ -2.35
Rsph3bQ9DA80 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.37□□□□□ -2.35
Rsph3bQ9DA80 Gm27928-201ENSMUST00000183747 256 ntBASIC0.37□□□□□ -2.35
Rsph3bQ9DA80 Gm25393-201ENSMUST00000157336 285 ntBASIC0.36□□□□□ -2.35
Rsph3bQ9DA80 Gm24223-201ENSMUST00000158827 90 ntBASIC0.36□□□□□ -2.35
Rsph3bQ9DA80 Mir200a-201ENSMUST00000083466 90 ntBASIC0.36□□□□□ -2.35
Rsph3bQ9DA80 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Mir1197-201ENSMUST00000117037 120 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Gm24246-201ENSMUST00000157315 132 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Gm22541-201ENSMUST00000158165 127 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Gm25693-201ENSMUST00000175443 85 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Gm26398-201ENSMUST00000179015 127 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.35□□□□□ -2.35
Rsph3bQ9DA80 Mir224-201ENSMUST00000083608 82 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms