Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.19□□□□□ -2.06
Trim42Q9D2H5 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.19□□□□□ -2.06
Trim42Q9D2H5 Gm25964-201ENSMUST00000157171 97 ntBASIC2.19□□□□□ -2.06
Trim42Q9D2H5 Mir3076-201ENSMUST00000175415 60 ntBASIC2.19□□□□□ -2.06
Trim42Q9D2H5 Snord87-201ENSMUST00000175437 87 ntBASIC2.19□□□□□ -2.06
Trim42Q9D2H5 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.19□□□□□ -2.06
Trim42Q9D2H5 Gm23482-201ENSMUST00000104172 122 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm24984-201ENSMUST00000104454 133 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm24686-201ENSMUST00000157755 93 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm25838-201ENSMUST00000158920 120 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm23306-201ENSMUST00000179058 105 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm28256-201ENSMUST00000188953 139 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Gm28559-201ENSMUST00000190532 139 ntBASIC2.18□□□□□ -2.06
Trim42Q9D2H5 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm24122-201ENSMUST00000104107 132 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm11694-201ENSMUST00000118637 159 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm26358-201ENSMUST00000158215 97 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm25866-201ENSMUST00000158245 112 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Mir7062-201ENSMUST00000185038 66 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm27544-201ENSMUST00000185069 155 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm28435-201ENSMUST00000185496 108 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Gm29047-201ENSMUST00000189816 108 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.17□□□□□ -2.06
Trim42Q9D2H5 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim42Q9D2H5 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim42Q9D2H5 Gm22200-201ENSMUST00000158614 67 ntBASIC2.16□□□□□ -2.06
Trim42Q9D2H5 Gm22093-201ENSMUST00000158980 111 ntBASIC2.16□□□□□ -2.06
Trim42Q9D2H5 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.16□□□□□ -2.06
Trim42Q9D2H5 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim42Q9D2H5 Gm24588-201ENSMUST00000116696 83 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Gm25552-201ENSMUST00000158081 91 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Gm23477-201ENSMUST00000158882 128 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Mir3064-201ENSMUST00000175532 67 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Mir7683-201ENSMUST00000183842 61 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Gm44602-201ENSMUST00000205948 132 ntBASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim42Q9D2H5 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Gm24366-201ENSMUST00000175383 86 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Mir509-201ENSMUST00000196089 75 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Gm43927-201ENSMUST00000204599 117 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Mir29a-201ENSMUST00000083676 88 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Snora69-201ENSMUST00000083708 131 ntBASIC2.14□□□□□ -2.07
Trim42Q9D2H5 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Gm22752-201ENSMUST00000102083 109 ntBASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Mir3096-201ENSMUST00000116685 71 ntBASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Gm25658-201ENSMUST00000158472 128 ntBASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Gm23208-201ENSMUST00000158666 127 ntBASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Mir3057-201ENSMUST00000175040 91 ntBASIC2.13□□□□□ -2.07
Trim42Q9D2H5 Gm25496-201ENSMUST00000104430 120 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm23763-201ENSMUST00000158345 60 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm22944-201ENSMUST00000158662 133 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm28767-201ENSMUST00000188601 114 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm24406-201ENSMUST00000083026 128 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm25629-201ENSMUST00000084001 107 ntBASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trim42Q9D2H5 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm25609-201ENSMUST00000104019 104 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm24068-201ENSMUST00000104513 132 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Mir1195-201ENSMUST00000116818 98 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm22227-201ENSMUST00000157356 259 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm25460-201ENSMUST00000157954 127 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm22500-201ENSMUST00000158982 99 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm26712-201ENSMUST00000180813 217 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.11□□□□□ -2.07
Trim42Q9D2H5 Gm22544-201ENSMUST00000104349 127 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Gm23803-201ENSMUST00000104610 132 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Mir1899-201ENSMUST00000122798 96 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Gm24221-201ENSMUST00000158833 313 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Mir3092-201ENSMUST00000174954 96 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Gm22413-201ENSMUST00000175465 85 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.1□□□□□ -2.07
Trim42Q9D2H5 Gm25756-201ENSMUST00000103990 136 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Gm24075-201ENSMUST00000158175 72 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Mir3075-201ENSMUST00000175340 85 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Mir6917-201ENSMUST00000184111 61 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Mir222-201ENSMUST00000083537 79 ntBASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trim42Q9D2H5 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
Trim42Q9D2H5 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trim42Q9D2H5 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm25619-201ENSMUST00000122621 104 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm24783-201ENSMUST00000157639 100 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm24331-201ENSMUST00000175099 67 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm23801-201ENSMUST00000175561 67 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm24485-201ENSMUST00000178283 67 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trim42Q9D2H5 Gm23889-201ENSMUST00000122689 104 ntBASIC2.07□□□□□ -2.08
Trim42Q9D2H5 Gm24648-201ENSMUST00000157111 132 ntBASIC2.07□□□□□ -2.08
Trim42Q9D2H5 Gm26359-201ENSMUST00000158873 101 ntBASIC2.07□□□□□ -2.08
Trim42Q9D2H5 Gm22887-201ENSMUST00000178586 107 ntBASIC2.07□□□□□ -2.08
Trim42Q9D2H5 Mir127-201ENSMUST00000093568 70 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 195.3 ms