Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26091-201ENSMUST00000122704 82 ntBASIC0.87□□□□□ -2.27
Ddx56Q9D0R4 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.87□□□□□ -2.27
Ddx56Q9D0R4 Mir1191-201ENSMUST00000116883 120 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 Gm12469-201ENSMUST00000117623 207 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 Gm26158-201ENSMUST00000158973 119 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 Gm25300-201ENSMUST00000175284 84 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 Mir7010-201ENSMUST00000183464 63 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.86□□□□□ -2.27
Ddx56Q9D0R4 Gm23766-201ENSMUST00000103894 80 ntBASIC0.85□□□□□ -2.27
Ddx56Q9D0R4 Mir100-201ENSMUST00000175270 80 ntBASIC0.85□□□□□ -2.27
Ddx56Q9D0R4 Mir669j-201ENSMUST00000179023 121 ntBASIC0.85□□□□□ -2.27
Ddx56Q9D0R4 Mir7663-201ENSMUST00000183950 61 ntBASIC0.85□□□□□ -2.27
Ddx56Q9D0R4 Mir410-201ENSMUST00000083563 81 ntBASIC0.85□□□□□ -2.27
Ddx56Q9D0R4 Gm22689-201ENSMUST00000102452 110 ntBASIC0.84□□□□□ -2.27
Ddx56Q9D0R4 Gm22451-201ENSMUST00000122803 151 ntBASIC0.84□□□□□ -2.27
Ddx56Q9D0R4 Gm25060-201ENSMUST00000157374 130 ntBASIC0.84□□□□□ -2.27
Ddx56Q9D0R4 Mir1954-201ENSMUST00000175595 86 ntBASIC0.84□□□□□ -2.27
Ddx56Q9D0R4 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.84□□□□□ -2.27
Ddx56Q9D0R4 Gm25506-201ENSMUST00000104339 70 ntBASIC0.83□□□□□ -2.28
Ddx56Q9D0R4 Gm22966-201ENSMUST00000157957 129 ntBASIC0.83□□□□□ -2.28
Ddx56Q9D0R4 Gm26290-201ENSMUST00000158891 145 ntBASIC0.83□□□□□ -2.28
Ddx56Q9D0R4 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
Ddx56Q9D0R4 Gm24223-201ENSMUST00000158827 90 ntBASIC0.82□□□□□ -2.28
Ddx56Q9D0R4 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.82□□□□□ -2.28
Ddx56Q9D0R4 Mir6389-201ENSMUST00000183661 102 ntBASIC0.82□□□□□ -2.28
Ddx56Q9D0R4 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.82□□□□□ -2.28
Ddx56Q9D0R4 Gm12432-201ENSMUST00000119540 186 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Gm22522-201ENSMUST00000158271 151 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Gm23857-201ENSMUST00000158379 111 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Gm23917-201ENSMUST00000175256 98 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Gm45492-201ENSMUST00000211611 288 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.81□□□□□ -2.28
Ddx56Q9D0R4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Gm25367-201ENSMUST00000158846 106 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Traj61-201ENSMUST00000165025 72 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Gm2077-201ENSMUST00000195017 319 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Gm23735-201ENSMUST00000082551 134 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Gm22681-201ENSMUST00000083853 106 ntBASIC0.8□□□□□ -2.28
Ddx56Q9D0R4 Gm22469-201ENSMUST00000104118 133 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm24717-201ENSMUST00000157522 124 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm23260-201ENSMUST00000158317 172 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm24001-201ENSMUST00000158463 85 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm27289-201ENSMUST00000183341 82 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm23239-201ENSMUST00000083006 181 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Mir448-201ENSMUST00000083516 112 ntBASIC0.79□□□□□ -2.28
Ddx56Q9D0R4 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Gm22541-201ENSMUST00000158165 127 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Gm22775-201ENSMUST00000177630 120 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Gm23569-201ENSMUST00000180120 120 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Gm25629-201ENSMUST00000084001 107 ntBASIC0.78□□□□□ -2.28
Ddx56Q9D0R4 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.77□□□□□ -2.29
Ddx56Q9D0R4 Gm26301-201ENSMUST00000104813 95 ntBASIC0.77□□□□□ -2.29
Ddx56Q9D0R4 Gm24500-201ENSMUST00000158447 124 ntBASIC0.77□□□□□ -2.29
Ddx56Q9D0R4 Gm44470-201ENSMUST00000203913 142 ntBASIC0.77□□□□□ -2.29
Ddx56Q9D0R4 Mir377-201ENSMUST00000083504 68 ntBASIC0.77□□□□□ -2.29
Ddx56Q9D0R4 Gm24579-201ENSMUST00000103964 144 ntBASIC0.76□□□□□ -2.29
Ddx56Q9D0R4 Gm26291-201ENSMUST00000158889 137 ntBASIC0.76□□□□□ -2.29
Ddx56Q9D0R4 Gm26412-201ENSMUST00000157666 55 ntBASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Gm24129-201ENSMUST00000158537 97 ntBASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Gm25693-201ENSMUST00000175443 85 ntBASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Gm27656-201ENSMUST00000185055 80 ntBASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Mir200a-201ENSMUST00000083466 90 ntBASIC0.75□□□□□ -2.29
Ddx56Q9D0R4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.74□□□□□ -2.29
Ddx56Q9D0R4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm24290-201ENSMUST00000157634 96 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm22349-201ENSMUST00000157864 107 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm26484-201ENSMUST00000158018 106 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm17528-201ENSMUST00000171026 239 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm26337-201ENSMUST00000178000 79 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm3702-201ENSMUST00000211754 346 ntBASIC0.73□□□□□ -2.29
Ddx56Q9D0R4 Gm25091-201ENSMUST00000103997 71 ntBASIC0.72□□□□□ -2.29
Ddx56Q9D0R4 Gm22030-201ENSMUST00000116942 63 ntBASIC0.72□□□□□ -2.29
Ddx56Q9D0R4 Gm24963-201ENSMUST00000157916 144 ntBASIC0.72□□□□□ -2.29
Ddx56Q9D0R4 Mir3109-201ENSMUST00000175301 88 ntBASIC0.72□□□□□ -2.29
Ddx56Q9D0R4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Ddx56Q9D0R4 Snord71-201ENSMUST00000104361 85 ntBASIC0.71□□□□□ -2.3
Ddx56Q9D0R4 Gm23651-201ENSMUST00000116755 120 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 Gm14884-201ENSMUST00000120456 196 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 Gm22286-201ENSMUST00000179708 107 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 Gm27943-201ENSMUST00000184844 116 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 Gm44859-201ENSMUST00000207831 94 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.7□□□□□ -2.3
Ddx56Q9D0R4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.69□□□□□ -2.3
Ddx56Q9D0R4 Gm24913-201ENSMUST00000157286 107 ntBASIC0.69□□□□□ -2.3
Ddx56Q9D0R4 Gm23340-201ENSMUST00000158955 123 ntBASIC0.69□□□□□ -2.3
Ddx56Q9D0R4 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.69□□□□□ -2.3
Ddx56Q9D0R4 Gm10351-201ENSMUST00000087694 125 ntBASIC0.69□□□□□ -2.3
Ddx56Q9D0R4 Gm12013-201ENSMUST00000121971 155 ntBASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 Gm25600-201ENSMUST00000158357 106 ntBASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 Mir21c-201ENSMUST00000184910 78 ntBASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 Mir376b-201ENSMUST00000195930 82 ntBASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Ddx56Q9D0R4 Mir6342-201ENSMUST00000183870 125 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 373 ms