Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.2□□□□□ -2.44
Ccdc43Q9CR29 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.2□□□□□ -2.44
Ccdc43Q9CR29 Snora75-201ENSMUST00000082903 133 ntBASIC-0.2□□□□□ -2.44
Ccdc43Q9CR29 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.2□□□□□ -2.44
Ccdc43Q9CR29 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.21□□□□□ -2.44
Ccdc43Q9CR29 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.22□□□□□ -2.44
Ccdc43Q9CR29 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.22□□□□□ -2.44
Ccdc43Q9CR29 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.22□□□□□ -2.44
Ccdc43Q9CR29 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.22□□□□□ -2.44
Ccdc43Q9CR29 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.23□□□□□ -2.45
Ccdc43Q9CR29 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.23□□□□□ -2.45
Ccdc43Q9CR29 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.23□□□□□ -2.45
Ccdc43Q9CR29 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.23□□□□□ -2.45
Ccdc43Q9CR29 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.23□□□□□ -2.45
Ccdc43Q9CR29 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.24□□□□□ -2.45
Ccdc43Q9CR29 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.24□□□□□ -2.45
Ccdc43Q9CR29 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.25□□□□□ -2.45
Ccdc43Q9CR29 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.25□□□□□ -2.45
Ccdc43Q9CR29 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.25□□□□□ -2.45
Ccdc43Q9CR29 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.25□□□□□ -2.45
Ccdc43Q9CR29 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.25□□□□□ -2.45
Ccdc43Q9CR29 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.26□□□□□ -2.45
Ccdc43Q9CR29 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.26□□□□□ -2.45
Ccdc43Q9CR29 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.26□□□□□ -2.45
Ccdc43Q9CR29 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.26□□□□□ -2.45
Ccdc43Q9CR29 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.26□□□□□ -2.45
Ccdc43Q9CR29 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.27□□□□□ -2.45
Ccdc43Q9CR29 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.27□□□□□ -2.45
Ccdc43Q9CR29 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.27□□□□□ -2.45
Ccdc43Q9CR29 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.28□□□□□ -2.45
Ccdc43Q9CR29 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.29□□□□□ -2.46
Ccdc43Q9CR29 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.29□□□□□ -2.46
Ccdc43Q9CR29 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.29□□□□□ -2.46
Ccdc43Q9CR29 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.29□□□□□ -2.46
Ccdc43Q9CR29 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.3□□□□□ -2.46
Ccdc43Q9CR29 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.31□□□□□ -2.46
Ccdc43Q9CR29 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.32□□□□□ -2.46
Ccdc43Q9CR29 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.32□□□□□ -2.46
Ccdc43Q9CR29 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.32□□□□□ -2.46
Ccdc43Q9CR29 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.32□□□□□ -2.46
Ccdc43Q9CR29 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.33□□□□□ -2.46
Ccdc43Q9CR29 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.33□□□□□ -2.46
Ccdc43Q9CR29 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.33□□□□□ -2.46
Ccdc43Q9CR29 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.33□□□□□ -2.46
Ccdc43Q9CR29 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.34□□□□□ -2.46
Ccdc43Q9CR29 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Ccdc43Q9CR29 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.36□□□□□ -2.47
Ccdc43Q9CR29 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.36□□□□□ -2.47
Ccdc43Q9CR29 Mir672-201ENSMUST00000102331 100 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.37□□□□□ -2.47
Ccdc43Q9CR29 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.38□□□□□ -2.47
Ccdc43Q9CR29 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Mir488-201ENSMUST00000093595 109 ntBASIC-0.39□□□□□ -2.47
Ccdc43Q9CR29 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.4□□□□□ -2.47
Ccdc43Q9CR29 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 207.6 ms