Protein–RNA interactions for Protein: Q9CQD4

Chmp1b2, Charged multivesicular body protein 1b-2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b2Q9CQD4 Gm16550-201ENSMUST00000162550 126 ntBASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 Trbv25-201ENSMUST00000194700 273 ntBASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 Gm42935-201ENSMUST00000202004 151 ntBASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23722-201ENSMUST00000083002 130 ntBASIC0.62□□□□□ -2.31
Chmp1b2Q9CQD4 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm22966-201ENSMUST00000157957 129 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23853-201ENSMUST00000158375 104 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm22775-201ENSMUST00000177630 120 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23569-201ENSMUST00000180120 120 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm42506-201ENSMUST00000202009 150 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Snord60-201ENSMUST00000082834 78 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.61□□□□□ -2.31
Chmp1b2Q9CQD4 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Gm22149-201ENSMUST00000104442 136 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Gm24001-201ENSMUST00000158463 85 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Gm24549-201ENSMUST00000158647 139 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Mir6394-201ENSMUST00000184738 99 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Mir30a-201ENSMUST00000083471 71 ntBASIC0.6□□□□□ -2.31
Chmp1b2Q9CQD4 Mir1191-201ENSMUST00000116883 120 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm26084-201ENSMUST00000157903 104 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23857-201ENSMUST00000158379 111 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm26290-201ENSMUST00000158891 145 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23917-201ENSMUST00000175256 98 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23416-201ENSMUST00000175520 95 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm26337-201ENSMUST00000178000 79 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm23922-201ENSMUST00000178792 79 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm24657-201ENSMUST00000180085 79 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm22996-201ENSMUST00000180236 79 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm44859-201ENSMUST00000207831 94 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 DQ267101-201ENSMUST00000082562 73 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Gm22681-201ENSMUST00000083853 106 ntBASIC0.59□□□□□ -2.31
Chmp1b2Q9CQD4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Gm24718-201ENSMUST00000157521 136 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Gm10548-202ENSMUST00000165672 272 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Gm22466-201ENSMUST00000175278 69 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Gm24323-201ENSMUST00000175342 77 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Gm26168-201ENSMUST00000083787 112 ntBASIC0.58□□□□□ -2.32
Chmp1b2Q9CQD4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Mir20b-201ENSMUST00000102087 80 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25091-201ENSMUST00000103997 71 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm23260-201ENSMUST00000158317 172 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25166-201ENSMUST00000158909 111 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm8034-201ENSMUST00000178853 132 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.57□□□□□ -2.32
Chmp1b2Q9CQD4 Gm24579-201ENSMUST00000103964 144 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25680-201ENSMUST00000116917 126 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm22635-201ENSMUST00000116962 126 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm23991-201ENSMUST00000117033 93 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm15289-201ENSMUST00000117793 244 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25899-201ENSMUST00000082672 141 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Mir362-201ENSMUST00000093592 65 ntBASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
Chmp1b2Q9CQD4 Gm23989-201ENSMUST00000117030 66 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Gm22842-201ENSMUST00000157709 118 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25367-201ENSMUST00000158846 106 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Gm43944-201ENSMUST00000205220 120 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Gm20734-201ENSMUST00000216939 193 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.55□□□□□ -2.32
Chmp1b2Q9CQD4 Gm11248-201ENSMUST00000119568 201 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm6985-201ENSMUST00000121255 271 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm24223-201ENSMUST00000158827 90 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm26291-201ENSMUST00000158889 137 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm26158-201ENSMUST00000158973 119 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Mir8116-201ENSMUST00000184134 97 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Mir6985-201ENSMUST00000184641 61 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Gm23239-201ENSMUST00000083006 181 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Mir377-201ENSMUST00000083504 68 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Mir10b-201ENSMUST00000083566 68 ntBASIC0.54□□□□□ -2.32
Chmp1b2Q9CQD4 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Chmp1b2Q9CQD4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 155.6 ms