Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm25529-201ENSMUST00000104850 92 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm23900-201ENSMUST00000157569 108 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm22727-201ENSMUST00000158090 116 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Snora24-201ENSMUST00000174989 130 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm24575-201ENSMUST00000175502 77 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm5900-201ENSMUST00000179862 375 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm6293-201ENSMUST00000050339 195 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Gm24523-201ENSMUST00000083965 132 ntBASIC2.3□□□□□ -2.04
Trim11Q99PQ2 Mir654-201ENSMUST00000104787 84 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 Gm24509-201ENSMUST00000157086 101 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 Gm25358-201ENSMUST00000157189 101 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 Gm24223-201ENSMUST00000158827 90 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.29□□□□□ -2.04
Trim11Q99PQ2 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Gm26133-201ENSMUST00000157363 100 ntBASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Mir3086-201ENSMUST00000175072 87 ntBASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Gm23726-201ENSMUST00000178937 67 ntBASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Gm7258-201ENSMUST00000179317 300 ntBASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Mir30d-201ENSMUST00000083503 82 ntBASIC2.28□□□□□ -2.04
Trim11Q99PQ2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Trim11Q99PQ2 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.27□□□□□ -2.05
Trim11Q99PQ2 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm25376-201ENSMUST00000104340 133 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm25658-201ENSMUST00000158472 128 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm25838-201ENSMUST00000158920 120 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm27722-201ENSMUST00000183908 76 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Mir6390-201ENSMUST00000184405 129 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm26207-201ENSMUST00000082909 104 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.26□□□□□ -2.05
Trim11Q99PQ2 Gm14039-201ENSMUST00000118705 101 ntBASIC2.25□□□□□ -2.05
Trim11Q99PQ2 Snord87-201ENSMUST00000175437 87 ntBASIC2.25□□□□□ -2.05
Trim11Q99PQ2 Gm26499-201ENSMUST00000178544 79 ntBASIC2.25□□□□□ -2.05
Trim11Q99PQ2 Gm26096-201ENSMUST00000179084 79 ntBASIC2.25□□□□□ -2.05
Trim11Q99PQ2 Gm45197-201ENSMUST00000205288 151 ntBASIC2.25□□□□□ -2.05
Trim11Q99PQ2 Mir1191-201ENSMUST00000116883 120 ntBASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Gm24378-201ENSMUST00000122699 106 ntBASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Gm21885-201ENSMUST00000178891 327 ntBASIC2.24□□□□□ -2.05
Trim11Q99PQ2 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trim11Q99PQ2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Scarna9-201ENSMUST00000104318 70 ntBASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Gm24068-201ENSMUST00000104513 132 ntBASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Mir344e-201ENSMUST00000104677 66 ntBASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Gm22200-201ENSMUST00000158614 67 ntBASIC2.23□□□□□ -2.05
Trim11Q99PQ2 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Gm27443-201ENSMUST00000184660 98 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Gm28435-201ENSMUST00000185496 108 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Gm29047-201ENSMUST00000189816 108 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.22□□□□□ -2.05
Trim11Q99PQ2 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Mir532-201ENSMUST00000093630 96 ntBASIC2.22□□□□□ -2.05
Trim11Q99PQ2 Mir6995-201ENSMUST00000183658 71 ntBASIC2.21□□□□□ -2.06
Trim11Q99PQ2 Gm25629-201ENSMUST00000084001 107 ntBASIC2.21□□□□□ -2.06
Trim11Q99PQ2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Trim11Q99PQ2 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Gm25901-201ENSMUST00000158494 130 ntBASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Gm25870-201ENSMUST00000179845 79 ntBASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Mir6950-201ENSMUST00000184438 73 ntBASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Gm28256-201ENSMUST00000188953 139 ntBASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Gm28559-201ENSMUST00000190532 139 ntBASIC2.2□□□□□ -2.06
Trim11Q99PQ2 Gm11694-201ENSMUST00000118637 159 ntBASIC2.19□□□□□ -2.06
Trim11Q99PQ2 Gm26358-201ENSMUST00000158215 97 ntBASIC2.19□□□□□ -2.06
Trim11Q99PQ2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.19□□□□□ -2.06
Trim11Q99PQ2 Mir7683-201ENSMUST00000183842 61 ntBASIC2.19□□□□□ -2.06
Trim11Q99PQ2 Gm28767-201ENSMUST00000188601 114 ntBASIC2.19□□□□□ -2.06
Trim11Q99PQ2 Gm23172-201ENSMUST00000157160 124 ntBASIC2.18□□□□□ -2.06
Trim11Q99PQ2 Gm24478-201ENSMUST00000157439 158 ntBASIC2.18□□□□□ -2.06
Trim11Q99PQ2 Gm23813-201ENSMUST00000175153 77 ntBASIC2.18□□□□□ -2.06
Trim11Q99PQ2 Mir29a-201ENSMUST00000083676 88 ntBASIC2.18□□□□□ -2.06
Trim11Q99PQ2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim11Q99PQ2 Gm23551-201ENSMUST00000116852 121 ntBASIC2.17□□□□□ -2.06
Trim11Q99PQ2 Gm24686-201ENSMUST00000157755 93 ntBASIC2.17□□□□□ -2.06
Trim11Q99PQ2 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.17□□□□□ -2.06
Trim11Q99PQ2 Mir6901-201ENSMUST00000185062 62 ntBASIC2.17□□□□□ -2.06
Trim11Q99PQ2 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm23482-201ENSMUST00000104172 122 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm24588-201ENSMUST00000116696 83 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm23208-201ENSMUST00000158666 127 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm24366-201ENSMUST00000175383 86 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm23306-201ENSMUST00000179058 105 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Mir6419-201ENSMUST00000184784 113 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm27544-201ENSMUST00000185069 155 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.16□□□□□ -2.06
Trim11Q99PQ2 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim11Q99PQ2 Gm24770-201ENSMUST00000158505 92 ntBASIC2.15□□□□□ -2.07
Trim11Q99PQ2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Mir3096-201ENSMUST00000116685 71 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Gm25964-201ENSMUST00000157171 97 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms