Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm27465-201ENSMUST00000184290 91 ntBASIC0.37□□□□□ -2.35
Cstf1Q99LC2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.37□□□□□ -2.35
Cstf1Q99LC2 Gm26207-201ENSMUST00000082909 104 ntBASIC0.37□□□□□ -2.35
Cstf1Q99LC2 Gm25410-201ENSMUST00000083758 137 ntBASIC0.37□□□□□ -2.35
Cstf1Q99LC2 Mir489-201ENSMUST00000093599 107 ntBASIC0.37□□□□□ -2.35
Cstf1Q99LC2 Gm25060-201ENSMUST00000157374 130 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Gm25444-201ENSMUST00000158999 113 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Gm37116-201ENSMUST00000195161 147 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Gm24527-201ENSMUST00000082920 107 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Gm10172-201ENSMUST00000085929 558 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Mir471-201ENSMUST00000093596 67 ntBASIC0.36□□□□□ -2.35
Cstf1Q99LC2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Cstf1Q99LC2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm15289-201ENSMUST00000117793 244 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm25980-201ENSMUST00000157176 218 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Mir3094-201ENSMUST00000175121 64 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm22699-201ENSMUST00000175376 105 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm44338-201ENSMUST00000198614 110 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm25814-201ENSMUST00000082754 107 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Snord61-201ENSMUST00000083176 71 ntBASIC0.35□□□□□ -2.35
Cstf1Q99LC2 Gm24793-201ENSMUST00000104289 132 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Gm22967-201ENSMUST00000157956 239 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Gm22989-201ENSMUST00000158313 86 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Mir6904-201ENSMUST00000183443 67 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Mir7116-201ENSMUST00000195956 70 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Gm44807-201ENSMUST00000206115 154 ntBASIC0.34□□□□□ -2.36
Cstf1Q99LC2 Gm23320-201ENSMUST00000104462 127 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm23990-201ENSMUST00000117031 117 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm15654-201ENSMUST00000152660 300 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm27934-201ENSMUST00000158795 63 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm20409-201ENSMUST00000173457 130 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm26097-201ENSMUST00000179642 93 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm26225-201ENSMUST00000082508 135 ntBASIC0.33□□□□□ -2.36
Cstf1Q99LC2 Gm23881-201ENSMUST00000116872 66 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm11644-201ENSMUST00000119735 150 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm22606-201ENSMUST00000158290 103 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm22139-201ENSMUST00000158747 105 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm27803-201ENSMUST00000183763 119 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm18665-201ENSMUST00000189783 270 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Mir30f-201ENSMUST00000196073 92 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Mir3969-201ENSMUST00000197106 92 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.32□□□□□ -2.36
Cstf1Q99LC2 Gm25599-201ENSMUST00000157816 103 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm25329-201ENSMUST00000158041 126 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm25364-201ENSMUST00000158851 107 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm25300-201ENSMUST00000175284 84 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm23947-201ENSMUST00000093636 107 ntBASIC0.31□□□□□ -2.36
Cstf1Q99LC2 Gm23989-201ENSMUST00000117030 66 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Gm23857-201ENSMUST00000158379 111 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Gm25716-201ENSMUST00000158628 104 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Gm23917-201ENSMUST00000175256 98 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Gm28767-201ENSMUST00000188601 114 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Snord47-201ENSMUST00000083034 77 ntBASIC0.3□□□□□ -2.36
Cstf1Q99LC2 Gm22373-201ENSMUST00000104584 89 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Gm22105-201ENSMUST00000116734 116 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Gm24381-201ENSMUST00000122697 104 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Gm16550-201ENSMUST00000162550 126 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Mir3089-201ENSMUST00000175350 84 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Mir7657-201ENSMUST00000196051 57 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Snord60-201ENSMUST00000082834 78 ntBASIC0.29□□□□□ -2.36
Cstf1Q99LC2 Gm23749-201ENSMUST00000104223 131 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm23253-201ENSMUST00000157441 104 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm23036-201ENSMUST00000157885 99 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Mir100-201ENSMUST00000175270 80 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Mir6342-201ENSMUST00000183870 125 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm27446-201ENSMUST00000183963 89 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Trbv25-201ENSMUST00000194700 273 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm25797-201ENSMUST00000082640 107 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Gm23509-201ENSMUST00000083080 160 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Mir377-201ENSMUST00000083504 68 ntBASIC0.28□□□□□ -2.36
Cstf1Q99LC2 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm24232-201ENSMUST00000104314 132 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm10548-202ENSMUST00000165672 272 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm43749-201ENSMUST00000199345 352 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm18502-201ENSMUST00000218679 199 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm23301-201ENSMUST00000082713 65 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Gm25894-201ENSMUST00000083458 75 ntBASIC0.27□□□□□ -2.37
Cstf1Q99LC2 Mir1191-201ENSMUST00000116883 120 ntBASIC0.26□□□□□ -2.37
Cstf1Q99LC2 Gm26290-201ENSMUST00000158891 145 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 247.3 ms