Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.12□□□□□ -2.59
Nup35Q8R4R6 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.12□□□□□ -2.59
Nup35Q8R4R6 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.12□□□□□ -2.59
Nup35Q8R4R6 Gm25793-201ENSMUST00000083287 107 ntBASIC-1.12□□□□□ -2.59
Nup35Q8R4R6 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.13□□□□□ -2.59
Nup35Q8R4R6 Mir3969-201ENSMUST00000197106 92 ntBASIC-1.13□□□□□ -2.59
Nup35Q8R4R6 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.13□□□□□ -2.59
Nup35Q8R4R6 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.13□□□□□ -2.59
Nup35Q8R4R6 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.14□□□□□ -2.59
Nup35Q8R4R6 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.14□□□□□ -2.59
Nup35Q8R4R6 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.14□□□□□ -2.59
Nup35Q8R4R6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.14□□□□□ -2.59
Nup35Q8R4R6 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.14□□□□□ -2.59
Nup35Q8R4R6 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm22790-201ENSMUST00000157229 129 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm23022-201ENSMUST00000158768 180 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm26160-201ENSMUST00000158965 63 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 AL935138.1-201ENSMUST00000215309 196 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.15□□□□□ -2.59
Nup35Q8R4R6 Gm22784-201ENSMUST00000104088 132 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm24392-201ENSMUST00000158136 103 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm24667-201ENSMUST00000158938 103 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm42935-201ENSMUST00000202004 151 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.16□□□□□ -2.6
Nup35Q8R4R6 Snord67-201ENSMUST00000104033 111 ntBASIC-1.17□□□□□ -2.6
Nup35Q8R4R6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-1.17□□□□□ -2.6
Nup35Q8R4R6 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.17□□□□□ -2.6
Nup35Q8R4R6 Gm24035-201ENSMUST00000082867 107 ntBASIC-1.17□□□□□ -2.6
Nup35Q8R4R6 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.18□□□□□ -2.6
Nup35Q8R4R6 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.18□□□□□ -2.6
Nup35Q8R4R6 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.18□□□□□ -2.6
Nup35Q8R4R6 Gm23242-201ENSMUST00000083055 107 ntBASIC-1.18□□□□□ -2.6
Nup35Q8R4R6 Gm23219-201ENSMUST00000158123 87 ntBASIC-1.19□□□□□ -2.6
Nup35Q8R4R6 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.19□□□□□ -2.6
Nup35Q8R4R6 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.19□□□□□ -2.6
Nup35Q8R4R6 Gm26287-201ENSMUST00000158887 81 ntBASIC-1.19□□□□□ -2.6
Nup35Q8R4R6 Gm12924-201ENSMUST00000121747 318 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm11204-201ENSMUST00000122438 147 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm22557-201ENSMUST00000157804 102 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Mir7093-201ENSMUST00000184195 101 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.2□□□□□ -2.6
Nup35Q8R4R6 Gm25414-201ENSMUST00000101814 107 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm44687-201ENSMUST00000204975 235 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm45005-201ENSMUST00000206640 157 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.21□□□□□ -2.6
Nup35Q8R4R6 Snora26-201ENSMUST00000175614 121 ntBASIC-1.22□□□□□ -2.6
Nup35Q8R4R6 AC192091.2-201ENSMUST00000217869 117 ntBASIC-1.22□□□□□ -2.6
Nup35Q8R4R6 Gm38280-201ENSMUST00000192610 158 ntBASIC-1.23□□□□□ -2.61
Nup35Q8R4R6 Mir489-201ENSMUST00000093599 107 ntBASIC-1.23□□□□□ -2.61
Nup35Q8R4R6 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 AC154552.1-201ENSMUST00000222969 202 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.24□□□□□ -2.61
Nup35Q8R4R6 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.25□□□□□ -2.61
Nup35Q8R4R6 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.25□□□□□ -2.61
Nup35Q8R4R6 Gm27446-201ENSMUST00000183963 89 ntBASIC-1.25□□□□□ -2.61
Nup35Q8R4R6 Gm28008-201ENSMUST00000184021 186 ntBASIC-1.25□□□□□ -2.61
Nup35Q8R4R6 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.25□□□□□ -2.61
Nup35Q8R4R6 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.26□□□□□ -2.61
Nup35Q8R4R6 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.26□□□□□ -2.61
Nup35Q8R4R6 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.26□□□□□ -2.61
Nup35Q8R4R6 Mir5624-201ENSMUST00000176635 61 ntBASIC-1.26□□□□□ -2.61
Nup35Q8R4R6 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.26□□□□□ -2.61
Nup35Q8R4R6 Gm24423-201ENSMUST00000101982 106 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 Gm22555-201ENSMUST00000157801 62 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 AC154213.2-201ENSMUST00000227138 187 ntBASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-1.27□□□□□ -2.61
Nup35Q8R4R6 n-R5s87-201ENSMUST00000122752 116 ntBASIC-1.28□□□□□ -2.61
Nup35Q8R4R6 Snord8-201ENSMUST00000175303 110 ntBASIC-1.28□□□□□ -2.61
Nup35Q8R4R6 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.28□□□□□ -2.61
Nup35Q8R4R6 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.28□□□□□ -2.61
Nup35Q8R4R6 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.29□□□□□ -2.62
Nup35Q8R4R6 Gm45313-201ENSMUST00000210584 178 ntBASIC-1.29□□□□□ -2.62
Nup35Q8R4R6 AC154296.2-201ENSMUST00000214696 545 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms