Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir6962-201ENSMUST00000199512 63 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 Gm25812-201ENSMUST00000082751 103 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 Gm26168-201ENSMUST00000083787 112 ntBASIC0.78□□□□□ -2.28
Ccdc28bQ8CEG5 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm25110-201ENSMUST00000116684 121 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm25775-201ENSMUST00000116716 121 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24795-201ENSMUST00000116737 121 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm25171-201ENSMUST00000116926 121 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm22558-201ENSMUST00000157326 95 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24575-201ENSMUST00000175502 77 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24926-201ENSMUST00000178053 79 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Gm22632-201ENSMUST00000178266 79 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.77□□□□□ -2.29
Ccdc28bQ8CEG5 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Gm23967-201ENSMUST00000175062 78 ntBASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Gm8034-201ENSMUST00000178853 132 ntBASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Gm26398-201ENSMUST00000179015 127 ntBASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Mir33-201ENSMUST00000083531 69 ntBASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Mir500-201ENSMUST00000093600 92 ntBASIC0.76□□□□□ -2.29
Ccdc28bQ8CEG5 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Gm22381-201ENSMUST00000158186 107 ntBASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Gm25768-201ENSMUST00000158570 98 ntBASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Gm36956-201ENSMUST00000193830 214 ntBASIC0.75□□□□□ -2.29
Ccdc28bQ8CEG5 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Snord69-201ENSMUST00000104024 80 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Gm23881-201ENSMUST00000116872 66 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Gm23434-201ENSMUST00000157179 100 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Gm25901-201ENSMUST00000158494 130 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Mir3079-201ENSMUST00000175428 90 ntBASIC0.74□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24605-201ENSMUST00000104772 96 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm23654-201ENSMUST00000116758 126 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm22196-201ENSMUST00000116865 109 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24916-201ENSMUST00000157287 79 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24942-201ENSMUST00000158328 114 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm10548-202ENSMUST00000165672 272 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Mir15a-201ENSMUST00000175266 84 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Gm27993-201ENSMUST00000184362 85 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Mir6390-201ENSMUST00000184405 129 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Mir21c-201ENSMUST00000184910 78 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Mir30a-201ENSMUST00000083471 71 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Mir410-201ENSMUST00000083563 81 ntBASIC0.73□□□□□ -2.29
Ccdc28bQ8CEG5 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Gm24894-201ENSMUST00000122744 118 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Mir6240-201ENSMUST00000184281 117 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Mir7665-201ENSMUST00000184907 63 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Gm44469-201ENSMUST00000198558 79 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Gm43944-201ENSMUST00000205220 120 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Mir101a-201ENSMUST00000083517 83 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Gm22753-201ENSMUST00000083657 107 ntBASIC0.72□□□□□ -2.29
Ccdc28bQ8CEG5 Gm26082-201ENSMUST00000104070 127 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm25753-201ENSMUST00000116792 121 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Mir1191-201ENSMUST00000116883 120 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24649-201ENSMUST00000157106 134 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm23601-201ENSMUST00000157259 131 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm23329-201ENSMUST00000157415 108 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24223-201ENSMUST00000158827 90 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm22466-201ENSMUST00000175278 69 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm43911-201ENSMUST00000203097 76 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24705-201ENSMUST00000082808 107 ntBASIC0.71□□□□□ -2.3
Ccdc28bQ8CEG5 Gm12469-201ENSMUST00000117623 207 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm6272-201ENSMUST00000121256 171 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm23853-201ENSMUST00000158375 104 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm25978-201ENSMUST00000158698 90 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm26290-201ENSMUST00000158891 145 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm22638-201ENSMUST00000179674 107 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm25820-201ENSMUST00000198589 127 ntBASIC0.7□□□□□ -2.3
Ccdc28bQ8CEG5 Gm22772-201ENSMUST00000104451 121 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24549-201ENSMUST00000158647 139 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24154-201ENSMUST00000175261 130 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Gm23714-201ENSMUST00000179259 105 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Snord32a-201ENSMUST00000083285 83 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Mir27b-201ENSMUST00000083541 73 ntBASIC0.69□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24579-201ENSMUST00000103964 144 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm22089-201ENSMUST00000158336 102 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm24129-201ENSMUST00000158537 97 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm25646-201ENSMUST00000178527 79 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm44488-201ENSMUST00000199467 119 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm25629-201ENSMUST00000084001 107 ntBASIC0.68□□□□□ -2.3
Ccdc28bQ8CEG5 Gm26158-201ENSMUST00000158973 119 ntBASIC0.67□□□□□ -2.3
Ccdc28bQ8CEG5 Mir7059-201ENSMUST00000184825 59 ntBASIC0.67□□□□□ -2.3
Ccdc28bQ8CEG5 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.67□□□□□ -2.3
Ccdc28bQ8CEG5 Gm23301-201ENSMUST00000082713 65 ntBASIC0.67□□□□□ -2.3
Ccdc28bQ8CEG5 Mir369-201ENSMUST00000083627 79 ntBASIC0.67□□□□□ -2.3
Ccdc28bQ8CEG5 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms