Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Snord60-201ENSMUST00000082834 78 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Mir33-201ENSMUST00000083531 69 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Gm25091-201ENSMUST00000103997 71 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Gm25623-201ENSMUST00000157216 108 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Gm27851-201ENSMUST00000183529 63 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.82□□□□□ -2.28
Atg4aQ8C9S8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.81□□□□□ -2.28
Atg4aQ8C9S8 Gm25428-201ENSMUST00000157608 114 ntBASIC0.81□□□□□ -2.28
Atg4aQ8C9S8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.81□□□□□ -2.28
Atg4aQ8C9S8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.81□□□□□ -2.28
Atg4aQ8C9S8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.81□□□□□ -2.28
Atg4aQ8C9S8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Snord69-201ENSMUST00000104024 80 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm25425-201ENSMUST00000157611 96 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm25901-201ENSMUST00000158494 130 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Mir6905-201ENSMUST00000184228 70 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm22753-201ENSMUST00000083657 107 ntBASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
Atg4aQ8C9S8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Gm11248-201ENSMUST00000119568 201 ntBASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Gm24676-201ENSMUST00000158758 75 ntBASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Traj61-201ENSMUST00000165025 72 ntBASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.79□□□□□ -2.28
Atg4aQ8C9S8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.78□□□□□ -2.28
Atg4aQ8C9S8 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Atg4aQ8C9S8 Gm38298-201ENSMUST00000193578 118 ntBASIC0.78□□□□□ -2.28
Atg4aQ8C9S8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Gm26168-201ENSMUST00000083787 112 ntBASIC0.77□□□□□ -2.29
Atg4aQ8C9S8 Snord64-201ENSMUST00000104003 67 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Mir1191-201ENSMUST00000116883 120 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm24913-201ENSMUST00000157286 107 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm24842-201ENSMUST00000158681 54 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm22708-201ENSMUST00000158987 103 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm26398-201ENSMUST00000179015 127 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm44308-201ENSMUST00000197080 99 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.76□□□□□ -2.29
Atg4aQ8C9S8 Mir695-201ENSMUST00000102261 109 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Gm10548-202ENSMUST00000165672 272 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Gm8034-201ENSMUST00000178853 132 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Gm27656-201ENSMUST00000185055 80 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Gm44469-201ENSMUST00000198558 79 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.75□□□□□ -2.29
Atg4aQ8C9S8 Gm24223-201ENSMUST00000158827 90 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm23340-201ENSMUST00000158955 123 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm26454-201ENSMUST00000082682 107 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.74□□□□□ -2.29
Atg4aQ8C9S8 Gm12469-201ENSMUST00000117623 207 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 Gm12013-201ENSMUST00000121971 155 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 Gm24167-201ENSMUST00000177733 124 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 Gm24028-201ENSMUST00000178991 124 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.73□□□□□ -2.29
Atg4aQ8C9S8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.72□□□□□ -2.29
Atg4aQ8C9S8 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.72□□□□□ -2.29
Atg4aQ8C9S8 Gm26158-201ENSMUST00000158973 119 ntBASIC0.72□□□□□ -2.29
Atg4aQ8C9S8 Mir21c-201ENSMUST00000184910 78 ntBASIC0.72□□□□□ -2.29
Atg4aQ8C9S8 Gm25006-201ENSMUST00000083813 107 ntBASIC0.72□□□□□ -2.29
Atg4aQ8C9S8 Gm23857-201ENSMUST00000158379 111 ntBASIC0.71□□□□□ -2.3
Atg4aQ8C9S8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.71□□□□□ -2.3
Atg4aQ8C9S8 Gm26290-201ENSMUST00000158891 145 ntBASIC0.71□□□□□ -2.3
Atg4aQ8C9S8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.71□□□□□ -2.3
Atg4aQ8C9S8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.71□□□□□ -2.3
Atg4aQ8C9S8 Gm26498-201ENSMUST00000177799 79 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms