Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26154-201ENSMUST00000102339 96 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm24988-201ENSMUST00000104460 121 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm24199-201ENSMUST00000157808 136 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm22425-201ENSMUST00000158532 138 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm24495-201ENSMUST00000178575 79 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm22253-201ENSMUST00000179870 79 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Gm24805-201ENSMUST00000082931 104 ntBASIC2.24□□□□□ -2.05
Usp40Q8BWR4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Gm27686-201ENSMUST00000185123 91 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Gm28794-201ENSMUST00000185276 136 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Gm24918-201ENSMUST00000083022 130 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.23□□□□□ -2.05
Usp40Q8BWR4 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Mir6369-201ENSMUST00000183772 106 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm27419-201ENSMUST00000184576 109 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm23570-201ENSMUST00000083029 104 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm26123-201ENSMUST00000083363 135 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm23344-201ENSMUST00000083818 68 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm22866-201ENSMUST00000083947 177 ntBASIC2.22□□□□□ -2.05
Usp40Q8BWR4 Gm24384-201ENSMUST00000122693 75 ntBASIC2.21□□□□□ -2.06
Usp40Q8BWR4 Gm23996-201ENSMUST00000158062 131 ntBASIC2.21□□□□□ -2.06
Usp40Q8BWR4 Gm22732-201ENSMUST00000158093 121 ntBASIC2.21□□□□□ -2.06
Usp40Q8BWR4 Mir3961-201ENSMUST00000198795 59 ntBASIC2.21□□□□□ -2.06
Usp40Q8BWR4 Gm15115-201ENSMUST00000121145 264 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 Gm24880-201ENSMUST00000158776 85 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 Gm3724-201ENSMUST00000197957 349 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 Mir5117-201ENSMUST00000083226 84 ntBASIC2.2□□□□□ -2.06
Usp40Q8BWR4 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm24868-201ENSMUST00000157265 136 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm26485-201ENSMUST00000158019 64 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm24077-201ENSMUST00000158183 136 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm26290-201ENSMUST00000158891 145 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm24333-201ENSMUST00000175101 84 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm23714-201ENSMUST00000179259 105 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Gm25788-201ENSMUST00000082721 131 ntBASIC2.19□□□□□ -2.06
Usp40Q8BWR4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm15654-201ENSMUST00000152660 300 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm22539-201ENSMUST00000158167 117 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm26213-201ENSMUST00000158582 110 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm23967-201ENSMUST00000175062 78 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm25750-201ENSMUST00000175483 112 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm44462-201ENSMUST00000199696 129 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Usp40Q8BWR4 Gm14884-201ENSMUST00000120456 196 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Gm24399-201ENSMUST00000157869 74 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Gm24770-201ENSMUST00000158505 92 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Gm25618-201ENSMUST00000179484 107 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Gm37557-201ENSMUST00000191640 139 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Gm25402-201ENSMUST00000082966 131 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Mir93-201ENSMUST00000083593 88 ntBASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usp40Q8BWR4 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Gm11966-201ENSMUST00000119907 87 ntBASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Gm25160-201ENSMUST00000158914 102 ntBASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Gm24174-201ENSMUST00000158933 111 ntBASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Gm23813-201ENSMUST00000175153 77 ntBASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Gm23375-201ENSMUST00000175407 83 ntBASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Usp40Q8BWR4 Mir1197-201ENSMUST00000117037 120 ntBASIC2.15□□□□□ -2.07
Usp40Q8BWR4 Gm25044-201ENSMUST00000158603 104 ntBASIC2.15□□□□□ -2.07
Usp40Q8BWR4 Gm25241-201ENSMUST00000174909 84 ntBASIC2.15□□□□□ -2.07
Usp40Q8BWR4 Gm26217-201ENSMUST00000175212 84 ntBASIC2.15□□□□□ -2.07
Usp40Q8BWR4 Mir6388-201ENSMUST00000184417 75 ntBASIC2.15□□□□□ -2.07
Usp40Q8BWR4 Gm23656-201ENSMUST00000122626 112 ntBASIC2.14□□□□□ -2.07
Usp40Q8BWR4 Gm24851-201ENSMUST00000158028 103 ntBASIC2.14□□□□□ -2.07
Usp40Q8BWR4 Mir7217-201ENSMUST00000200304 62 ntBASIC2.14□□□□□ -2.07
Usp40Q8BWR4 Mir300-201ENSMUST00000083485 79 ntBASIC2.14□□□□□ -2.07
Usp40Q8BWR4 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm24984-201ENSMUST00000104454 133 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm22815-201ENSMUST00000157451 62 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm23558-201ENSMUST00000157823 80 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm16539-201ENSMUST00000160086 327 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm25958-201ENSMUST00000175114 71 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm24575-201ENSMUST00000175502 77 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Gm23267-201ENSMUST00000178490 132 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Mir30f-201ENSMUST00000196073 92 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usp40Q8BWR4 Snora3-201ENSMUST00000083082 132 ntBASIC2.12□□□□□ -2.07
Usp40Q8BWR4 Mir429-201ENSMUST00000083493 83 ntBASIC2.12□□□□□ -2.07
Usp40Q8BWR4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Usp40Q8BWR4 Gm24907-201ENSMUST00000116932 128 ntBASIC2.11□□□□□ -2.07
Usp40Q8BWR4 Gm23763-201ENSMUST00000158345 60 ntBASIC2.11□□□□□ -2.07
Usp40Q8BWR4 Gm45197-201ENSMUST00000205288 151 ntBASIC2.11□□□□□ -2.07
Usp40Q8BWR4 Mir221-201ENSMUST00000083488 95 ntBASIC2.11□□□□□ -2.07
Usp40Q8BWR4 Gm25964-201ENSMUST00000157171 97 ntBASIC2.1□□□□□ -2.07
Usp40Q8BWR4 Gm25368-201ENSMUST00000158847 131 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms