Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Gm25135-201ENSMUST00000082648 143 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Gm23679-201ENSMUST00000083161 119 ntBASIC-0.43□□□□□ -2.48
Ccdc40Q8BI79 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.44□□□□□ -2.48
Ccdc40Q8BI79 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.44□□□□□ -2.48
Ccdc40Q8BI79 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.44□□□□□ -2.48
Ccdc40Q8BI79 AC109214.2-201ENSMUST00000220089 358 ntBASIC-0.44□□□□□ -2.48
Ccdc40Q8BI79 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.44□□□□□ -2.48
Ccdc40Q8BI79 Snord19-201ENSMUST00000104609 76 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.45□□□□□ -2.48
Ccdc40Q8BI79 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.46□□□□□ -2.48
Ccdc40Q8BI79 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.46□□□□□ -2.48
Ccdc40Q8BI79 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Ccdc40Q8BI79 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.47□□□□□ -2.48
Ccdc40Q8BI79 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.48□□□□□ -2.49
Ccdc40Q8BI79 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.49□□□□□ -2.49
Ccdc40Q8BI79 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
Ccdc40Q8BI79 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.49□□□□□ -2.49
Ccdc40Q8BI79 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.49□□□□□ -2.49
Ccdc40Q8BI79 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.5□□□□□ -2.49
Ccdc40Q8BI79 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.5□□□□□ -2.49
Ccdc40Q8BI79 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.5□□□□□ -2.49
Ccdc40Q8BI79 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.5□□□□□ -2.49
Ccdc40Q8BI79 Mir201-201ENSMUST00000083470 66 ntBASIC-0.5□□□□□ -2.49
Ccdc40Q8BI79 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.51□□□□□ -2.49
Ccdc40Q8BI79 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.51□□□□□ -2.49
Ccdc40Q8BI79 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.51□□□□□ -2.49
Ccdc40Q8BI79 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.51□□□□□ -2.49
Ccdc40Q8BI79 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.51□□□□□ -2.49
Ccdc40Q8BI79 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.52□□□□□ -2.49
Ccdc40Q8BI79 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.53□□□□□ -2.49
Ccdc40Q8BI79 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.53□□□□□ -2.49
Ccdc40Q8BI79 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.54□□□□□ -2.5
Ccdc40Q8BI79 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.54□□□□□ -2.5
Ccdc40Q8BI79 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.54□□□□□ -2.5
Ccdc40Q8BI79 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.54□□□□□ -2.5
Ccdc40Q8BI79 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.54□□□□□ -2.5
Ccdc40Q8BI79 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.55□□□□□ -2.5
Ccdc40Q8BI79 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.55□□□□□ -2.5
Ccdc40Q8BI79 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.55□□□□□ -2.5
Ccdc40Q8BI79 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.55□□□□□ -2.5
Ccdc40Q8BI79 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.56□□□□□ -2.5
Ccdc40Q8BI79 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.56□□□□□ -2.5
Ccdc40Q8BI79 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.56□□□□□ -2.5
Ccdc40Q8BI79 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.56□□□□□ -2.5
Ccdc40Q8BI79 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.56□□□□□ -2.5
Ccdc40Q8BI79 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.57□□□□□ -2.5
Ccdc40Q8BI79 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.57□□□□□ -2.5
Ccdc40Q8BI79 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.57□□□□□ -2.5
Ccdc40Q8BI79 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.57□□□□□ -2.5
Ccdc40Q8BI79 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.57□□□□□ -2.5
Ccdc40Q8BI79 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.58□□□□□ -2.5
Ccdc40Q8BI79 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.58□□□□□ -2.5
Ccdc40Q8BI79 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.59□□□□□ -2.5
Ccdc40Q8BI79 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.59□□□□□ -2.5
Ccdc40Q8BI79 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.59□□□□□ -2.5
Ccdc40Q8BI79 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.6□□□□□ -2.51
Ccdc40Q8BI79 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.6□□□□□ -2.51
Ccdc40Q8BI79 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Mir327-201ENSMUST00000199328 69 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.61□□□□□ -2.51
Ccdc40Q8BI79 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.62□□□□□ -2.51
Ccdc40Q8BI79 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.62□□□□□ -2.51
Ccdc40Q8BI79 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.62□□□□□ -2.51
Ccdc40Q8BI79 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.62□□□□□ -2.51
Ccdc40Q8BI79 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.62□□□□□ -2.51
Ccdc40Q8BI79 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.63□□□□□ -2.51
Ccdc40Q8BI79 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.64□□□□□ -2.51
Ccdc40Q8BI79 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.65□□□□□ -2.51
Ccdc40Q8BI79 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.65□□□□□ -2.51
Ccdc40Q8BI79 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.65□□□□□ -2.51
Ccdc40Q8BI79 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.65□□□□□ -2.51
Ccdc40Q8BI79 Mir141-201ENSMUST00000083540 72 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 294.4 ms