Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm29107-201ENSMUST00000190910 347 ntBASIC-0.53□□□□□ -2.49
Clrn3Q8BHH8 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.53□□□□□ -2.49
Clrn3Q8BHH8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
Clrn3Q8BHH8 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.54□□□□□ -2.5
Clrn3Q8BHH8 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.54□□□□□ -2.5
Clrn3Q8BHH8 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.54□□□□□ -2.5
Clrn3Q8BHH8 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.54□□□□□ -2.5
Clrn3Q8BHH8 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.54□□□□□ -2.5
Clrn3Q8BHH8 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.55□□□□□ -2.5
Clrn3Q8BHH8 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.56□□□□□ -2.5
Clrn3Q8BHH8 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.56□□□□□ -2.5
Clrn3Q8BHH8 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.56□□□□□ -2.5
Clrn3Q8BHH8 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.56□□□□□ -2.5
Clrn3Q8BHH8 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.56□□□□□ -2.5
Clrn3Q8BHH8 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.57□□□□□ -2.5
Clrn3Q8BHH8 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.58□□□□□ -2.5
Clrn3Q8BHH8 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.58□□□□□ -2.5
Clrn3Q8BHH8 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.58□□□□□ -2.5
Clrn3Q8BHH8 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.58□□□□□ -2.5
Clrn3Q8BHH8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.58□□□□□ -2.5
Clrn3Q8BHH8 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.59□□□□□ -2.5
Clrn3Q8BHH8 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.59□□□□□ -2.5
Clrn3Q8BHH8 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.59□□□□□ -2.5
Clrn3Q8BHH8 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.59□□□□□ -2.5
Clrn3Q8BHH8 Gm23451-201ENSMUST00000083328 122 ntBASIC-0.59□□□□□ -2.5
Clrn3Q8BHH8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm22836-201ENSMUST00000158441 61 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.6□□□□□ -2.51
Clrn3Q8BHH8 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Mir201-201ENSMUST00000083470 66 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.61□□□□□ -2.51
Clrn3Q8BHH8 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.62□□□□□ -2.51
Clrn3Q8BHH8 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.62□□□□□ -2.51
Clrn3Q8BHH8 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.62□□□□□ -2.51
Clrn3Q8BHH8 Snord19-201ENSMUST00000104609 76 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.63□□□□□ -2.51
Clrn3Q8BHH8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.64□□□□□ -2.51
Clrn3Q8BHH8 Mir541-201ENSMUST00000102097 90 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.65□□□□□ -2.51
Clrn3Q8BHH8 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.66□□□□□ -2.52
Clrn3Q8BHH8 Mir881-201ENSMUST00000104844 78 ntBASIC-0.66□□□□□ -2.52
Clrn3Q8BHH8 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.66□□□□□ -2.52
Clrn3Q8BHH8 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.66□□□□□ -2.52
Clrn3Q8BHH8 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.67□□□□□ -2.52
Clrn3Q8BHH8 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.68□□□□□ -2.52
Clrn3Q8BHH8 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.68□□□□□ -2.52
Clrn3Q8BHH8 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.68□□□□□ -2.52
Clrn3Q8BHH8 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.68□□□□□ -2.52
Clrn3Q8BHH8 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.68□□□□□ -2.52
Clrn3Q8BHH8 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.69□□□□□ -2.52
Clrn3Q8BHH8 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.69□□□□□ -2.52
Clrn3Q8BHH8 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.69□□□□□ -2.52
Clrn3Q8BHH8 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.7□□□□□ -2.52
Clrn3Q8BHH8 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.7□□□□□ -2.52
Clrn3Q8BHH8 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.7□□□□□ -2.52
Clrn3Q8BHH8 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.71□□□□□ -2.52
Clrn3Q8BHH8 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.71□□□□□ -2.52
Clrn3Q8BHH8 Gm37845-201ENSMUST00000194977 355 ntBASIC-0.71□□□□□ -2.52
Clrn3Q8BHH8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms