Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm25586-201ENSMUST00000082499 112 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.61□□□□□ -2.51
Ttc28Q80XJ3 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm24707-201ENSMUST00000082812 107 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.62□□□□□ -2.51
Ttc28Q80XJ3 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Snord100-201ENSMUST00000116836 74 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm14007-201ENSMUST00000118288 210 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Snora19-201ENSMUST00000082962 132 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.63□□□□□ -2.51
Ttc28Q80XJ3 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm23145-201ENSMUST00000178912 79 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Mir702-201ENSMUST00000102285 109 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm24538-201ENSMUST00000082612 107 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm23451-201ENSMUST00000083328 122 ntBASIC-0.64□□□□□ -2.51
Ttc28Q80XJ3 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm24111-201ENSMUST00000175491 97 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.65□□□□□ -2.51
Ttc28Q80XJ3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.66□□□□□ -2.51
Ttc28Q80XJ3 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.66□□□□□ -2.51
Ttc28Q80XJ3 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.66□□□□□ -2.51
Ttc28Q80XJ3 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.66□□□□□ -2.51
Ttc28Q80XJ3 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.66□□□□□ -2.51
Ttc28Q80XJ3 Zfp950-206ENSMUST00000178819 171 ntBASIC-0.66□□□□□ -2.52
Ttc28Q80XJ3 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.66□□□□□ -2.52
Ttc28Q80XJ3 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.66□□□□□ -2.52
Ttc28Q80XJ3 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.66□□□□□ -2.52
Ttc28Q80XJ3 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.66□□□□□ -2.52
Ttc28Q80XJ3 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.67□□□□□ -2.52
Ttc28Q80XJ3 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 207.6 ms