Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 Gm24054-201ENSMUST00000158619 105 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 Gm22699-201ENSMUST00000175376 105 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.71□□□□□ -2.3
Smarca1Q6PGB8 Gm22373-201ENSMUST00000104584 89 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 Gm23303-201ENSMUST00000082714 152 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 Gm25136-201ENSMUST00000083253 115 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.7□□□□□ -2.3
Smarca1Q6PGB8 Gm44489-201ENSMUST00000104619 97 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm11644-201ENSMUST00000119735 150 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm22340-201ENSMUST00000157717 114 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Mir3094-201ENSMUST00000175121 64 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm24445-201ENSMUST00000083981 107 ntBASIC0.69□□□□□ -2.3
Smarca1Q6PGB8 Gm24555-201ENSMUST00000104548 124 ntBASIC0.68□□□□□ -2.3
Smarca1Q6PGB8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.68□□□□□ -2.3
Smarca1Q6PGB8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.68□□□□□ -2.3
Smarca1Q6PGB8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.68□□□□□ -2.3
Smarca1Q6PGB8 Gm10172-201ENSMUST00000085929 558 ntBASIC0.68□□□□□ -2.3
Smarca1Q6PGB8 Snord90-201ENSMUST00000104568 111 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Gm24106-201ENSMUST00000175498 127 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.67□□□□□ -2.3
Smarca1Q6PGB8 Gm23708-201ENSMUST00000104367 123 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Gm25329-201ENSMUST00000158041 126 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Gm25247-201ENSMUST00000175475 90 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Gm23947-201ENSMUST00000093636 107 ntBASIC0.66□□□□□ -2.3
Smarca1Q6PGB8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm24772-201ENSMUST00000158507 110 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm10548-202ENSMUST00000165672 272 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm44469-201ENSMUST00000198558 79 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm23445-201ENSMUST00000082800 107 ntBASIC0.65□□□□□ -2.31
Smarca1Q6PGB8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.64□□□□□ -2.31
Smarca1Q6PGB8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.64□□□□□ -2.31
Smarca1Q6PGB8 Gm23509-201ENSMUST00000083080 160 ntBASIC0.64□□□□□ -2.31
Smarca1Q6PGB8 Snord72-201ENSMUST00000104549 81 ntBASIC0.63□□□□□ -2.31
Smarca1Q6PGB8 Gm26158-201ENSMUST00000158973 119 ntBASIC0.63□□□□□ -2.31
Smarca1Q6PGB8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.63□□□□□ -2.31
Smarca1Q6PGB8 Gm42935-201ENSMUST00000202004 151 ntBASIC0.63□□□□□ -2.31
Smarca1Q6PGB8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Smarca1Q6PGB8 Mir100-201ENSMUST00000175270 80 ntBASIC0.62□□□□□ -2.31
Smarca1Q6PGB8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.62□□□□□ -2.31
Smarca1Q6PGB8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.62□□□□□ -2.31
Smarca1Q6PGB8 Gm25401-201ENSMUST00000082975 106 ntBASIC0.62□□□□□ -2.31
Smarca1Q6PGB8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.61□□□□□ -2.31
Smarca1Q6PGB8 Gm25797-201ENSMUST00000082640 107 ntBASIC0.61□□□□□ -2.31
Smarca1Q6PGB8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.6□□□□□ -2.31
Smarca1Q6PGB8 Gm23504-201ENSMUST00000158988 95 ntBASIC0.6□□□□□ -2.31
Smarca1Q6PGB8 Gm12469-201ENSMUST00000117623 207 ntBASIC0.59□□□□□ -2.31
Smarca1Q6PGB8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.59□□□□□ -2.31
Smarca1Q6PGB8 Gm23857-201ENSMUST00000158379 111 ntBASIC0.59□□□□□ -2.31
Smarca1Q6PGB8 Gm18502-201ENSMUST00000218679 199 ntBASIC0.59□□□□□ -2.31
Smarca1Q6PGB8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
Smarca1Q6PGB8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.58□□□□□ -2.32
Smarca1Q6PGB8 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Smarca1Q6PGB8 Gm24461-201ENSMUST00000082735 103 ntBASIC0.58□□□□□ -2.32
Smarca1Q6PGB8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Smarca1Q6PGB8 Mir1191-201ENSMUST00000116883 120 ntBASIC0.57□□□□□ -2.32
Smarca1Q6PGB8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.57□□□□□ -2.32
Smarca1Q6PGB8 Mir377-201ENSMUST00000083504 68 ntBASIC0.57□□□□□ -2.32
Smarca1Q6PGB8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.56□□□□□ -2.32
Smarca1Q6PGB8 Gm23253-201ENSMUST00000157441 104 ntBASIC0.56□□□□□ -2.32
Smarca1Q6PGB8 Gm27928-201ENSMUST00000183747 256 ntBASIC0.56□□□□□ -2.32
Smarca1Q6PGB8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Smarca1Q6PGB8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.55□□□□□ -2.32
Smarca1Q6PGB8 Gm26011-201ENSMUST00000104410 104 ntBASIC0.54□□□□□ -2.32
Smarca1Q6PGB8 Gm24223-201ENSMUST00000158827 90 ntBASIC0.54□□□□□ -2.32
Smarca1Q6PGB8 Gm26398-201ENSMUST00000179015 127 ntBASIC0.54□□□□□ -2.32
Smarca1Q6PGB8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.54□□□□□ -2.32
Smarca1Q6PGB8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.52□□□□□ -2.33
Smarca1Q6PGB8 Gm22541-201ENSMUST00000158165 127 ntBASIC0.52□□□□□ -2.33
Smarca1Q6PGB8 Gm44322-201ENSMUST00000196830 115 ntBASIC0.52□□□□□ -2.33
Smarca1Q6PGB8 Mir1197-201ENSMUST00000117037 120 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 158.7 ms