Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm25680-201ENSMUST00000116917 126 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Gm22635-201ENSMUST00000116962 126 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Gm23122-201ENSMUST00000157645 103 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Gm25831-201ENSMUST00000158924 163 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Mir15a-201ENSMUST00000175266 84 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Gm44488-201ENSMUST00000199467 119 ntBASIC1.13□□□□□ -2.23
Rnf220Q6PDX6 Gm25832-201ENSMUST00000104140 130 ntBASIC1.12□□□□□ -2.23
Rnf220Q6PDX6 Gm26089-201ENSMUST00000157898 107 ntBASIC1.12□□□□□ -2.23
Rnf220Q6PDX6 Gm22466-201ENSMUST00000175278 69 ntBASIC1.12□□□□□ -2.23
Rnf220Q6PDX6 Snord69-201ENSMUST00000104024 80 ntBASIC1.11□□□□□ -2.23
Rnf220Q6PDX6 Gm24902-201ENSMUST00000158126 123 ntBASIC1.11□□□□□ -2.23
Rnf220Q6PDX6 Gm44469-201ENSMUST00000198558 79 ntBASIC1.11□□□□□ -2.23
Rnf220Q6PDX6 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.11□□□□□ -2.23
Rnf220Q6PDX6 Mir211-201ENSMUST00000083651 106 ntBASIC1.11□□□□□ -2.23
Rnf220Q6PDX6 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm12469-201ENSMUST00000117623 207 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm6272-201ENSMUST00000121256 171 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm24649-201ENSMUST00000157106 134 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm24549-201ENSMUST00000158647 139 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm26290-201ENSMUST00000158891 145 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm27993-201ENSMUST00000184362 85 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Mir33-201ENSMUST00000083531 69 ntBASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Rnf220Q6PDX6 Gm22772-201ENSMUST00000104451 121 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm23654-201ENSMUST00000116758 126 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm12086-201ENSMUST00000120863 228 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm10548-202ENSMUST00000165672 272 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm45429-201ENSMUST00000209527 172 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm22980-201ENSMUST00000082608 70 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm24705-201ENSMUST00000082808 107 ntBASIC1.09□□□□□ -2.23
Rnf220Q6PDX6 Gm24894-201ENSMUST00000122744 118 ntBASIC1.08□□□□□ -2.24
Rnf220Q6PDX6 Gm23853-201ENSMUST00000158375 104 ntBASIC1.08□□□□□ -2.24
Rnf220Q6PDX6 Snord35a-201ENSMUST00000083884 90 ntBASIC1.08□□□□□ -2.24
Rnf220Q6PDX6 Gm23986-201ENSMUST00000157144 63 ntBASIC1.07□□□□□ -2.24
Rnf220Q6PDX6 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.07□□□□□ -2.24
Rnf220Q6PDX6 Mir369-201ENSMUST00000083627 79 ntBASIC1.07□□□□□ -2.24
Rnf220Q6PDX6 Gm22786-201ENSMUST00000104086 122 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm23857-201ENSMUST00000158379 111 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm25978-201ENSMUST00000158698 90 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm26158-201ENSMUST00000158973 119 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm23967-201ENSMUST00000175062 78 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm28270-201ENSMUST00000188550 109 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm28328-201ENSMUST00000188869 109 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm23301-201ENSMUST00000082713 65 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm23507-201ENSMUST00000083078 107 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm25683-201ENSMUST00000083940 131 ntBASIC1.06□□□□□ -2.24
Rnf220Q6PDX6 Gm23714-201ENSMUST00000179259 105 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 Gm43324-201ENSMUST00000197482 289 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 DQ267101-201ENSMUST00000082562 73 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 Snord32a-201ENSMUST00000083285 83 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 Mir101a-201ENSMUST00000083517 83 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 Mir410-201ENSMUST00000083563 81 ntBASIC1.05□□□□□ -2.24
Rnf220Q6PDX6 Mir802-201ENSMUST00000103258 97 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Gm23336-201ENSMUST00000117023 123 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Gm23601-201ENSMUST00000157259 131 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Gm27326-201ENSMUST00000183504 95 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Mir7063-201ENSMUST00000184158 91 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Gm25820-201ENSMUST00000198589 127 ntBASIC1.04□□□□□ -2.24
Rnf220Q6PDX6 Mir764-201ENSMUST00000103259 108 ntBASIC1.03□□□□□ -2.24
Rnf220Q6PDX6 Gm23893-201ENSMUST00000158106 134 ntBASIC1.03□□□□□ -2.24
Rnf220Q6PDX6 Gm23917-201ENSMUST00000175256 98 ntBASIC1.03□□□□□ -2.24
Rnf220Q6PDX6 Gm27419-201ENSMUST00000184576 109 ntBASIC1.03□□□□□ -2.24
Rnf220Q6PDX6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.03□□□□□ -2.24
Rnf220Q6PDX6 Gm23384-201ENSMUST00000158593 103 ntBASIC1.02□□□□□ -2.25
Rnf220Q6PDX6 Gm25646-201ENSMUST00000178527 79 ntBASIC1.02□□□□□ -2.25
Rnf220Q6PDX6 Mir6905-201ENSMUST00000184228 70 ntBASIC1.02□□□□□ -2.25
Rnf220Q6PDX6 Gm22089-201ENSMUST00000158336 102 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm23351-201ENSMUST00000158427 125 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm25069-201ENSMUST00000175238 86 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm23416-201ENSMUST00000175520 95 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Mir8119-201ENSMUST00000183371 129 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm28794-201ENSMUST00000185276 136 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Mir6962-201ENSMUST00000199512 63 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm44211-201ENSMUST00000204867 145 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm25138-201ENSMUST00000083248 136 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Gm25629-201ENSMUST00000084001 107 ntBASIC1.01□□□□□ -2.25
Rnf220Q6PDX6 Mir695-201ENSMUST00000102261 109 ntBASIC1□□□□□ -2.25
Rnf220Q6PDX6 Gm25753-201ENSMUST00000116792 121 ntBASIC1□□□□□ -2.25
Rnf220Q6PDX6 Gm24129-201ENSMUST00000158537 97 ntBASIC1□□□□□ -2.25
Rnf220Q6PDX6 Scarna3a-201ENSMUST00000158911 140 ntBASIC1□□□□□ -2.25
Rnf220Q6PDX6 Gm22828-201ENSMUST00000083768 107 ntBASIC1□□□□□ -2.25
Rnf220Q6PDX6 Snord78-201ENSMUST00000104032 66 ntBASIC0.99□□□□□ -2.25
Rnf220Q6PDX6 Gm24431-201ENSMUST00000104073 66 ntBASIC0.99□□□□□ -2.25
Rnf220Q6PDX6 Gm25089-201ENSMUST00000102015 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm23989-201ENSMUST00000117030 66 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Mir100-201ENSMUST00000175270 80 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm25840-201ENSMUST00000177821 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm24952-201ENSMUST00000177909 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm23682-201ENSMUST00000178146 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm24652-201ENSMUST00000178223 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm22629-201ENSMUST00000178272 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm24021-201ENSMUST00000178435 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm22274-201ENSMUST00000178441 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm22050-201ENSMUST00000178442 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm23688-201ENSMUST00000178502 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm23944-201ENSMUST00000178607 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm26283-201ENSMUST00000178625 79 ntBASIC0.98□□□□□ -2.25
Rnf220Q6PDX6 Gm25452-201ENSMUST00000178776 79 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 200.4 ms