Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25390-201ENSMUST00000157341 103 ntBASIC0.04□□□□□ -2.4
Usf1Q61069 Gm25693-201ENSMUST00000175443 85 ntBASIC0.04□□□□□ -2.4
Usf1Q61069 Mir382-201ENSMUST00000083494 76 ntBASIC0.04□□□□□ -2.4
Usf1Q61069 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.04□□□□□ -2.4
Usf1Q61069 Gm24132-201ENSMUST00000104745 91 ntBASIC0.03□□□□□ -2.4
Usf1Q61069 Gm23080-201ENSMUST00000157846 103 ntBASIC0.03□□□□□ -2.4
Usf1Q61069 Gm22951-201ENSMUST00000179471 107 ntBASIC0.03□□□□□ -2.4
Usf1Q61069 Mir3969-201ENSMUST00000197106 92 ntBASIC0.03□□□□□ -2.4
Usf1Q61069 Gm24290-201ENSMUST00000157634 96 ntBASIC0.02□□□□□ -2.41
Usf1Q61069 Gm25834-201ENSMUST00000158916 101 ntBASIC0.02□□□□□ -2.41
Usf1Q61069 Gm20409-201ENSMUST00000173457 130 ntBASIC0.02□□□□□ -2.41
Usf1Q61069 Trbv25-201ENSMUST00000194700 273 ntBASIC0.02□□□□□ -2.41
Usf1Q61069 Mir6915-201ENSMUST00000198839 69 ntBASIC0.02□□□□□ -2.41
Usf1Q61069 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.02□□□□□ -2.41
Usf1Q61069 Gm22030-201ENSMUST00000116942 63 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm27934-201ENSMUST00000158795 63 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm22476-201ENSMUST00000158902 100 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm27446-201ENSMUST00000183963 89 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Usf1Q61069 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm43381-201ENSMUST00000198553 165 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Usf1Q61069 Gm14838-201ENSMUST00000118913 248 ntBASIC0□□□□□ -2.41
Usf1Q61069 Gm13065-201ENSMUST00000119178 141 ntBASIC0□□□□□ -2.41
Usf1Q61069 Mir376b-201ENSMUST00000195930 82 ntBASIC0□□□□□ -2.41
Usf1Q61069 Mir191-201ENSMUST00000196210 74 ntBASIC0□□□□□ -2.41
Usf1Q61069 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0□□□□□ -2.41
Usf1Q61069 Gm22303-201ENSMUST00000082686 122 ntBASIC0□□□□□ -2.41
Usf1Q61069 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.01□□□□□ -2.41
Usf1Q61069 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.01□□□□□ -2.41
Usf1Q61069 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.01□□□□□ -2.41
Usf1Q61069 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.01□□□□□ -2.41
Usf1Q61069 Mir669l-201ENSMUST00000103771 98 ntBASIC-0.02□□□□□ -2.41
Usf1Q61069 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Usf1Q61069 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.02□□□□□ -2.41
Usf1Q61069 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.02□□□□□ -2.41
Usf1Q61069 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.02□□□□□ -2.41
Usf1Q61069 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.03□□□□□ -2.41
Usf1Q61069 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.03□□□□□ -2.41
Usf1Q61069 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.03□□□□□ -2.41
Usf1Q61069 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.03□□□□□ -2.41
Usf1Q61069 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.04□□□□□ -2.42
Usf1Q61069 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.04□□□□□ -2.42
Usf1Q61069 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.04□□□□□ -2.42
Usf1Q61069 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.04□□□□□ -2.42
Usf1Q61069 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.05□□□□□ -2.42
Usf1Q61069 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.05□□□□□ -2.42
Usf1Q61069 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.05□□□□□ -2.42
Usf1Q61069 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.05□□□□□ -2.42
Usf1Q61069 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Usf1Q61069 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.06□□□□□ -2.42
Usf1Q61069 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.06□□□□□ -2.42
Usf1Q61069 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.06□□□□□ -2.42
Usf1Q61069 Snora75-201ENSMUST00000082903 133 ntBASIC-0.06□□□□□ -2.42
Usf1Q61069 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.06□□□□□ -2.42
Usf1Q61069 Mir672-201ENSMUST00000102331 100 ntBASIC-0.07□□□□□ -2.42
Usf1Q61069 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.07□□□□□ -2.42
Usf1Q61069 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
Usf1Q61069 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.07□□□□□ -2.42
Usf1Q61069 Mir488-201ENSMUST00000093595 109 ntBASIC-0.07□□□□□ -2.42
Usf1Q61069 Gm44409-201ENSMUST00000198810 166 ntBASIC-0.08□□□□□ -2.42
Usf1Q61069 Gm44909-201ENSMUST00000208756 165 ntBASIC-0.08□□□□□ -2.42
Usf1Q61069 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.08□□□□□ -2.42
Usf1Q61069 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.08□□□□□ -2.42
Usf1Q61069 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Mir18-201ENSMUST00000083469 96 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.09□□□□□ -2.42
Usf1Q61069 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.1□□□□□ -2.43
Usf1Q61069 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms