Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm22319-201ENSMUST00000157147 122 ntBASIC2,42□□□□□ -2,02
Scaf1Q5U4C3 Gm26358-201ENSMUST00000158215 97 ntBASIC2,42□□□□□ -2,02
Scaf1Q5U4C3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2,42□□□□□ -2,02
Scaf1Q5U4C3 Gm25541-201ENSMUST00000116888 126 ntBASIC2,41□□□□□ -2,02
Scaf1Q5U4C3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2,41□□□□□ -2,02
Scaf1Q5U4C3 Gm22963-201ENSMUST00000157960 91 ntBASIC2,41□□□□□ -2,02
Scaf1Q5U4C3 Snord96a-201ENSMUST00000082791 81 ntBASIC2,41□□□□□ -2,02
Scaf1Q5U4C3 Mir709-201ENSMUST00000102190 88 ntBASIC2,4□□□□□ -2,03
Scaf1Q5U4C3 Gm24588-201ENSMUST00000116696 83 ntBASIC2,4□□□□□ -2,03
Scaf1Q5U4C3 Gm25976-201ENSMUST00000158695 130 ntBASIC2,4□□□□□ -2,03
Scaf1Q5U4C3 Gm24575-201ENSMUST00000175502 77 ntBASIC2,4□□□□□ -2,03
Scaf1Q5U4C3 Gm23244-201ENSMUST00000083375 92 ntBASIC2,4□□□□□ -2,03
Scaf1Q5U4C3 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2,39□□□□□ -2,03
Scaf1Q5U4C3 Gm24165-201ENSMUST00000082718 128 ntBASIC2,39□□□□□ -2,03
Scaf1Q5U4C3 Gm27420-201ENSMUST00000183823 79 ntBASIC2,38□□□□□ -2,03
Scaf1Q5U4C3 AC160962.3-201ENSMUST00000225914 112 ntBASIC2,38□□□□□ -2,03
Scaf1Q5U4C3 Gm24524-201ENSMUST00000082925 170 ntBASIC2,38□□□□□ -2,03
Scaf1Q5U4C3 Scarna9-201ENSMUST00000104318 70 ntBASIC2,37□□□□□ -2,03
Scaf1Q5U4C3 Gm25936-201ENSMUST00000179952 114 ntBASIC2,37□□□□□ -2,03
Scaf1Q5U4C3 Trbv25-201ENSMUST00000194700 273 ntBASIC2,37□□□□□ -2,03
Scaf1Q5U4C3 AC117232.1-201ENSMUST00000197964 119 ntBASIC2,37□□□□□ -2,03
Scaf1Q5U4C3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2,36□□□□□ -2,03
Scaf1Q5U4C3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2,36□□□□□ -2,03
Scaf1Q5U4C3 Gm22603-201ENSMUST00000157603 96 ntBASIC2,36□□□□□ -2,03
Scaf1Q5U4C3 Gm44948-201ENSMUST00000209050 149 ntBASIC2,36□□□□□ -2,03
Scaf1Q5U4C3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm22761-201ENSMUST00000102278 96 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm25832-201ENSMUST00000104140 130 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm24728-201ENSMUST00000158226 125 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm23351-201ENSMUST00000158427 125 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm26290-201ENSMUST00000158891 145 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Mir148b-201ENSMUST00000083626 97 ntBASIC2,35□□□□□ -2,03
Scaf1Q5U4C3 Gm24783-201ENSMUST00000157639 100 ntBASIC2,34□□□□□ -2,03
Scaf1Q5U4C3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2,34□□□□□ -2,03
Scaf1Q5U4C3 Gm43977-201ENSMUST00000203970 189 ntBASIC2,34□□□□□ -2,03
Scaf1Q5U4C3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2,34□□□□□ -2,03
Scaf1Q5U4C3 Gm22089-201ENSMUST00000158336 102 ntBASIC2,33□□□□□ -2,04
Scaf1Q5U4C3 Mir468-201ENSMUST00000197332 78 ntBASIC2,33□□□□□ -2,04
Scaf1Q5U4C3 Gm24650-201ENSMUST00000157105 103 ntBASIC2,32□□□□□ -2,04
Scaf1Q5U4C3 Gm24223-201ENSMUST00000158827 90 ntBASIC2,32□□□□□ -2,04
Scaf1Q5U4C3 Mir7241-201ENSMUST00000184532 64 ntBASIC2,32□□□□□ -2,04
Scaf1Q5U4C3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2,31□□□□□ -2,04
Scaf1Q5U4C3 Gm23763-201ENSMUST00000158345 60 ntBASIC2,3□□□□□ -2,04
Scaf1Q5U4C3 Gm23114-201ENSMUST00000158478 117 ntBASIC2,3□□□□□ -2,04
Scaf1Q5U4C3 Mir1961-201ENSMUST00000158643 112 ntBASIC2,3□□□□□ -2,04
Scaf1Q5U4C3 AL928567.1-201ENSMUST00000197891 138 ntBASIC2,3□□□□□ -2,04
Scaf1Q5U4C3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC2,3□□□□□ -2,04
Scaf1Q5U4C3 Mir1191-201ENSMUST00000116883 120 ntBASIC2,29□□□□□ -2,04
Scaf1Q5U4C3 Gm22801-201ENSMUST00000175624 84 ntBASIC2,29□□□□□ -2,04
Scaf1Q5U4C3 Gm25629-201ENSMUST00000084001 107 ntBASIC2,29□□□□□ -2,04
Scaf1Q5U4C3 Gm22503-201ENSMUST00000158983 115 ntBASIC2,28□□□□□ -2,04
Scaf1Q5U4C3 Mir450b-201ENSMUST00000102095 82 ntBASIC2,27□□□□□ -2,05
Scaf1Q5U4C3 Gm22944-201ENSMUST00000158662 133 ntBASIC2,27□□□□□ -2,05
Scaf1Q5U4C3 Gm28794-201ENSMUST00000185276 136 ntBASIC2,27□□□□□ -2,05
Scaf1Q5U4C3 Gm26062-201ENSMUST00000083379 107 ntBASIC2,27□□□□□ -2,05
Scaf1Q5U4C3 Snord80-201ENSMUST00000083801 81 ntBASIC2,27□□□□□ -2,05
Scaf1Q5U4C3 Gm24271-201ENSMUST00000102327 111 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Mir764-201ENSMUST00000103259 108 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Gm27544-201ENSMUST00000185069 155 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 AL772271.1-201ENSMUST00000196848 65 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Gm26224-201ENSMUST00000082506 80 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Snord60-201ENSMUST00000082834 78 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Gm24099-201ENSMUST00000083384 107 ntBASIC2,26□□□□□ -2,05
Scaf1Q5U4C3 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2,25□□□□□ -2,05
Scaf1Q5U4C3 Gm14882-201ENSMUST00000117216 218 ntBASIC2,25□□□□□ -2,05
Scaf1Q5U4C3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2,25□□□□□ -2,05
Scaf1Q5U4C3 n-R5s70-201ENSMUST00000122650 116 ntBASIC2,25□□□□□ -2,05
Scaf1Q5U4C3 Gm22845-201ENSMUST00000157712 104 ntBASIC2,25□□□□□ -2,05
Scaf1Q5U4C3 Gm25759-201ENSMUST00000103988 129 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 Gm26369-201ENSMUST00000157825 100 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 Gm22706-201ENSMUST00000157907 112 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 Mir3083-201ENSMUST00000175377 64 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 AC140930.2-201ENSMUST00000221803 109 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 Gm26109-201ENSMUST00000083970 70 ntBASIC2,24□□□□□ -2,05
Scaf1Q5U4C3 Mir1899-201ENSMUST00000122798 96 ntBASIC2,23□□□□□ -2,05
Scaf1Q5U4C3 Gm22212-201ENSMUST00000158096 106 ntBASIC2,23□□□□□ -2,05
Scaf1Q5U4C3 Mir6950-201ENSMUST00000184438 73 ntBASIC2,23□□□□□ -2,05
Scaf1Q5U4C3 Gm26181-201ENSMUST00000157687 106 ntBASIC2,22□□□□□ -2,05
Scaf1Q5U4C3 Gm24547-201ENSMUST00000158649 149 ntBASIC2,22□□□□□ -2,05
Scaf1Q5U4C3 Gm18433-201ENSMUST00000192747 197 ntBASIC2,22□□□□□ -2,05
Scaf1Q5U4C3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2,22□□□□□ -2,05
Scaf1Q5U4C3 Gm26274-201ENSMUST00000157103 321 ntBASIC2,21□□□□□ -2,06
Scaf1Q5U4C3 Gm25393-201ENSMUST00000157336 285 ntBASIC2,21□□□□□ -2,06
Scaf1Q5U4C3 Gm25618-201ENSMUST00000179484 107 ntBASIC2,21□□□□□ -2,06
Scaf1Q5U4C3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2,21□□□□□ -2,06
Scaf1Q5U4C3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2,21□□□□□ -2,06
Scaf1Q5U4C3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2,2□□□□□ -2,06
Scaf1Q5U4C3 Snord13-201ENSMUST00000157627 104 ntBASIC2,2□□□□□ -2,06
Scaf1Q5U4C3 Gm24808-201ENSMUST00000157993 118 ntBASIC2,2□□□□□ -2,06
Scaf1Q5U4C3 Gm25370-201ENSMUST00000158159 94 ntBASIC2,2□□□□□ -2,06
Scaf1Q5U4C3 Gm44396-201ENSMUST00000199843 114 ntBASIC2,2□□□□□ -2,06
Scaf1Q5U4C3 Gm26080-201ENSMUST00000104069 131 ntBASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Gm14884-201ENSMUST00000120456 196 ntBASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Gm25279-201ENSMUST00000122608 133 ntBASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Traj60-201ENSMUST00000167781 54 ntBASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Gm28383-201ENSMUST00000187563 139 ntBASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2,19□□□□□ -2,06
Scaf1Q5U4C3 Gm25337-201ENSMUST00000083723 104 ntBASIC2,19□□□□□ -2,06
Retrieved 100 of 76,532 protein–RNA pairs in 103,7 ms