Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir146-201ENSMUST00000083667 65 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.26□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir881-201ENSMUST00000104844 78 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.27□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.28□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.28□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.28□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.29□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.3□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.3□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.3□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir541-201ENSMUST00000102097 90 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Snord61-201ENSMUST00000083176 71 ntBASIC-0.31□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.32□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.32□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.32□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.32□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.33□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.33□□□□□ -2.46
Ccdc88aQ5SNZ0 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.33□□□□□ -2.46
Ccdc88aQ5SNZ0 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.33□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.34□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.35□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.35□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.35□□□□□ -2.46
Ccdc88aQ5SNZ0 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.35□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.35□□□□□ -2.47
Ccdc88aQ5SNZ0 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.35□□□□□ -2.47
Ccdc88aQ5SNZ0 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-0.36□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.36□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.36□□□□□ -2.47
Ccdc88aQ5SNZ0 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.37□□□□□ -2.47
Ccdc88aQ5SNZ0 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.38□□□□□ -2.47
Ccdc88aQ5SNZ0 Mir201-201ENSMUST00000083470 66 ntBASIC-0.38□□□□□ -2.47
Ccdc88aQ5SNZ0 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.39□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.39□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.39□□□□□ -2.47
Ccdc88aQ5SNZ0 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 151.7 ms