Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23996-201ENSMUST00000158062 131 ntBASIC4.1□□□□□ -1.75
Trim41Q5NCC3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim41Q5NCC3 Gm45197-201ENSMUST00000205288 151 ntBASIC4.1□□□□□ -1.75
Trim41Q5NCC3 Gm26207-201ENSMUST00000082909 104 ntBASIC4.1□□□□□ -1.75
Trim41Q5NCC3 Gm37895-201ENSMUST00000192448 4550 ntBASIC4.1□□□□□ -1.75
Trim41Q5NCC3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Trim41Q5NCC3 Gm24223-201ENSMUST00000158827 90 ntBASIC4.09□□□□□ -1.75
Trim41Q5NCC3 AC154506.4-201ENSMUST00000224898 3416 ntBASIC4.08□□□□□ -1.76
Trim41Q5NCC3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim41Q5NCC3 Mir3968-201ENSMUST00000175355 100 ntBASIC4.08□□□□□ -1.76
Trim41Q5NCC3 Mir6388-201ENSMUST00000184417 75 ntBASIC4.08□□□□□ -1.76
Trim41Q5NCC3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm25552-201ENSMUST00000158081 91 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm28435-201ENSMUST00000185496 108 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm20118-201ENSMUST00000187207 162 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm29047-201ENSMUST00000189816 108 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 AC132384.11-201ENSMUST00000219676 178 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm25038-201ENSMUST00000082928 130 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm25199-201ENSMUST00000083095 104 ntBASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trim41Q5NCC3 Gm22554-201ENSMUST00000157798 147 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Gm25161-201ENSMUST00000158913 132 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Gm24333-201ENSMUST00000175101 84 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Gm23306-201ENSMUST00000179058 105 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Snora3-201ENSMUST00000083082 132 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Mir221-201ENSMUST00000083488 95 ntBASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim41Q5NCC3 Gm24475-201ENSMUST00000157435 143 ntBASIC4.05□□□□□ -1.76
Trim41Q5NCC3 Gm26499-201ENSMUST00000178544 79 ntBASIC4.05□□□□□ -1.76
Trim41Q5NCC3 Gm26096-201ENSMUST00000179084 79 ntBASIC4.05□□□□□ -1.76
Trim41Q5NCC3 AC158537.2-201ENSMUST00000223575 150 ntBASIC4.05□□□□□ -1.76
Trim41Q5NCC3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim41Q5NCC3 Gm7209-201ENSMUST00000122339 333 ntBASIC4.04□□□□□ -1.76
Trim41Q5NCC3 Gm22884-201ENSMUST00000083127 140 ntBASIC4.04□□□□□ -1.76
Trim41Q5NCC3 Gm22469-201ENSMUST00000104118 133 ntBASIC4.03□□□□□ -1.76
Trim41Q5NCC3 Gm14588-201ENSMUST00000119895 172 ntBASIC4.03□□□□□ -1.76
Trim41Q5NCC3 Gm16539-201ENSMUST00000160086 327 ntBASIC4.03□□□□□ -1.76
Trim41Q5NCC3 Gm25996-201ENSMUST00000175393 117 ntBASIC4.03□□□□□ -1.76
Trim41Q5NCC3 Gm24523-201ENSMUST00000083965 132 ntBASIC4.03□□□□□ -1.76
Trim41Q5NCC3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm25992-201ENSMUST00000102437 109 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm12432-201ENSMUST00000119540 186 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm26099-201ENSMUST00000157248 109 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm20477-201ENSMUST00000174028 280 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Gm43038-201ENSMUST00000202359 88 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 AC122769.2-201ENSMUST00000227248 302 ntBASIC4.02□□□□□ -1.77
Trim41Q5NCC3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim41Q5NCC3 Gm26082-201ENSMUST00000104070 127 ntBASIC4.01□□□□□ -1.77
Trim41Q5NCC3 Scarna9-201ENSMUST00000104318 70 ntBASIC4.01□□□□□ -1.77
Trim41Q5NCC3 Mir1191-201ENSMUST00000116883 120 ntBASIC4.01□□□□□ -1.77
Trim41Q5NCC3 Gm27326-201ENSMUST00000183504 95 ntBASIC4.01□□□□□ -1.77
Trim41Q5NCC3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim41Q5NCC3 n-R5s164-201ENSMUST00000122664 112 ntBASIC4□□□□□ -1.77
Trim41Q5NCC3 Gm25901-201ENSMUST00000158494 130 ntBASIC4□□□□□ -1.77
Trim41Q5NCC3 Gm43865-201ENSMUST00000204721 127 ntBASIC4□□□□□ -1.77
Trim41Q5NCC3 AC141438.3-201ENSMUST00000215632 202 ntBASIC4□□□□□ -1.77
Trim41Q5NCC3 Gm6109-201ENSMUST00000223297 348 ntBASIC4□□□□□ -1.77
Trim41Q5NCC3 Gm25949-201ENSMUST00000175333 114 ntBASIC3.99□□□□□ -1.77
Trim41Q5NCC3 Mir6394-201ENSMUST00000184738 99 ntBASIC3.99□□□□□ -1.77
Trim41Q5NCC3 Gm24313-201ENSMUST00000082561 133 ntBASIC3.99□□□□□ -1.77
Trim41Q5NCC3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim41Q5NCC3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim41Q5NCC3 Gm25787-201ENSMUST00000104709 92 ntBASIC3.98□□□□□ -1.77
Trim41Q5NCC3 Gm24509-201ENSMUST00000157086 101 ntBASIC3.98□□□□□ -1.77
Trim41Q5NCC3 Gm25358-201ENSMUST00000157189 101 ntBASIC3.98□□□□□ -1.77
Trim41Q5NCC3 Gm23900-201ENSMUST00000157569 108 ntBASIC3.98□□□□□ -1.77
Trim41Q5NCC3 Mir344-201ENSMUST00000083634 95 ntBASIC3.98□□□□□ -1.77
Trim41Q5NCC3 Gm42664-201ENSMUST00000199417 3239 ntBASIC3.97□□□□□ -1.77
Trim41Q5NCC3 Gm43626-201ENSMUST00000198575 162 ntBASIC3.97□□□□□ -1.77
Trim41Q5NCC3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim41Q5NCC3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC3.96□□□□□ -1.77
Trim41Q5NCC3 Gm26029-201ENSMUST00000158659 132 ntBASIC3.96□□□□□ -1.78
Trim41Q5NCC3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim41Q5NCC3 Mir878-201ENSMUST00000104680 78 ntBASIC3.95□□□□□ -1.78
Trim41Q5NCC3 Mir3064-201ENSMUST00000175532 67 ntBASIC3.95□□□□□ -1.78
Trim41Q5NCC3 AC160550.1-201ENSMUST00000228659 181 ntBASIC3.95□□□□□ -1.78
Trim41Q5NCC3 Mir29a-201ENSMUST00000083676 88 ntBASIC3.95□□□□□ -1.78
Trim41Q5NCC3 Gm25526-201ENSMUST00000104332 132 ntBASIC3.94□□□□□ -1.78
Trim41Q5NCC3 Gm26133-201ENSMUST00000157363 100 ntBASIC3.94□□□□□ -1.78
Trim41Q5NCC3 AC160976.1-201ENSMUST00000215092 148 ntBASIC3.94□□□□□ -1.78
Trim41Q5NCC3 Gm23763-201ENSMUST00000158345 60 ntBASIC3.93□□□□□ -1.78
Trim41Q5NCC3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim41Q5NCC3 Gm26406-201ENSMUST00000158503 124 ntBASIC3.92□□□□□ -1.78
Trim41Q5NCC3 Gm21885-201ENSMUST00000178891 327 ntBASIC3.92□□□□□ -1.78
Trim41Q5NCC3 Gm24445-201ENSMUST00000083981 107 ntBASIC3.92□□□□□ -1.78
Trim41Q5NCC3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Gm24049-201ENSMUST00000102409 100 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Gm25964-201ENSMUST00000157171 97 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Gm24686-201ENSMUST00000157755 93 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Gm25870-201ENSMUST00000179845 79 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Gm43911-201ENSMUST00000203097 76 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC3.91□□□□□ -1.78
Trim41Q5NCC3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim41Q5NCC3 Gm22159-201ENSMUST00000158412 130 ntBASIC3.9□□□□□ -1.79
Trim41Q5NCC3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim41Q5NCC3 Mir6985-201ENSMUST00000184641 61 ntBASIC3.89□□□□□ -1.79
Trim41Q5NCC3 Gm24588-201ENSMUST00000116696 83 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 173.8 ms