Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir377-201ENSMUST00000083504 68 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm23320-201ENSMUST00000104462 127 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm22105-201ENSMUST00000116734 116 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Mir1191-201ENSMUST00000116883 120 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm14626-201ENSMUST00000117619 216 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm26097-201ENSMUST00000179642 93 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm27803-201ENSMUST00000183763 119 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm37330-201ENSMUST00000192606 153 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Usp28Q5I043 Mir7229-201ENSMUST00000197062 53 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm44457-201ENSMUST00000198109 76 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm44455-201ENSMUST00000200061 82 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Gm24457-201ENSMUST00000083196 105 ntBASIC0.27□□□□□ -2.37
Usp28Q5I043 Mir20b-201ENSMUST00000102087 80 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Mir466h-201ENSMUST00000104748 81 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm12469-201ENSMUST00000117623 207 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm23783-201ENSMUST00000157941 102 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm25693-201ENSMUST00000175443 85 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm27717-201ENSMUST00000183933 151 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm44469-201ENSMUST00000198558 79 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm25894-201ENSMUST00000083458 75 ntBASIC0.26□□□□□ -2.37
Usp28Q5I043 Gm22989-201ENSMUST00000158313 86 ntBASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm22239-201ENSMUST00000175220 103 ntBASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm25633-201ENSMUST00000178565 107 ntBASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm22621-201ENSMUST00000179678 74 ntBASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm25136-201ENSMUST00000083253 115 ntBASIC0.25□□□□□ -2.37
Usp28Q5I043 Gm11644-201ENSMUST00000119735 150 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm22967-201ENSMUST00000157956 239 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm23852-201ENSMUST00000158376 77 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm22139-201ENSMUST00000158747 105 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Usp28Q5I043 Trbv25-201ENSMUST00000194700 273 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm23347-201ENSMUST00000083823 82 ntBASIC0.24□□□□□ -2.37
Usp28Q5I043 Gm25787-201ENSMUST00000104709 92 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm25980-201ENSMUST00000157176 218 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24290-201ENSMUST00000157634 96 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24772-201ENSMUST00000158507 110 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24131-201ENSMUST00000158539 107 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24054-201ENSMUST00000158619 105 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm26468-201ENSMUST00000158644 106 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24321-201ENSMUST00000175348 80 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm42935-201ENSMUST00000202004 151 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm23445-201ENSMUST00000082800 107 ntBASIC0.23□□□□□ -2.37
Usp28Q5I043 Gm24555-201ENSMUST00000104548 124 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm25565-201ENSMUST00000104605 105 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm22337-201ENSMUST00000157721 132 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm24223-201ENSMUST00000158827 90 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm29535-201ENSMUST00000185723 109 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm28143-201ENSMUST00000191082 109 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm23140-201ENSMUST00000082487 107 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Mir200a-201ENSMUST00000083466 90 ntBASIC0.22□□□□□ -2.37
Usp28Q5I043 Gm22699-201ENSMUST00000175376 105 ntBASIC0.21□□□□□ -2.38
Usp28Q5I043 Gm44338-201ENSMUST00000198614 110 ntBASIC0.21□□□□□ -2.38
Usp28Q5I043 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.2□□□□□ -2.38
Usp28Q5I043 Gm22030-201ENSMUST00000116942 63 ntBASIC0.2□□□□□ -2.38
Usp28Q5I043 Gm44853-201ENSMUST00000209070 250 ntBASIC0.2□□□□□ -2.38
Usp28Q5I043 Gm3702-201ENSMUST00000211754 346 ntBASIC0.2□□□□□ -2.38
Usp28Q5I043 Gm23509-201ENSMUST00000083080 160 ntBASIC0.2□□□□□ -2.38
Usp28Q5I043 Gm24833-201ENSMUST00000116775 120 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Gm22541-201ENSMUST00000158165 127 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Gm26290-201ENSMUST00000158891 145 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Mir3105-201ENSMUST00000175480 85 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Mir7077-201ENSMUST00000183991 57 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Mir1949-202ENSMUST00000199259 70 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.19□□□□□ -2.38
Usp28Q5I043 Mir224-201ENSMUST00000083608 82 ntBASIC0.19□□□□□ -2.38
Usp28Q5I043 Mir710-201ENSMUST00000102088 110 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Snord70-201ENSMUST00000104157 87 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Gm22373-201ENSMUST00000104584 89 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Gm23253-201ENSMUST00000157441 104 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Gm25600-201ENSMUST00000158357 106 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Gm23864-201ENSMUST00000177607 107 ntBASIC0.18□□□□□ -2.38
Usp28Q5I043 Mir1197-201ENSMUST00000117037 120 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 Gm25599-201ENSMUST00000157816 103 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 Scarna8-201ENSMUST00000158333 131 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 Gm27980-201ENSMUST00000184094 169 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 Gm27943-201ENSMUST00000184844 116 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Usp28Q5I043 Gm23947-201ENSMUST00000093636 107 ntBASIC0.17□□□□□ -2.38
Usp28Q5I043 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.16□□□□□ -2.38
Usp28Q5I043 Gm25716-201ENSMUST00000158628 104 ntBASIC0.16□□□□□ -2.38
Usp28Q5I043 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms