Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm22203-201ENSMUST00000158605 58 ntBASIC-2.82□□□□□ -2.86
Ccdc88bQ4QRL3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-2.82□□□□□ -2.86
Ccdc88bQ4QRL3 Gm26420-201ENSMUST00000104273 103 ntBASIC-2.83□□□□□ -2.86
Ccdc88bQ4QRL3 Gm25619-201ENSMUST00000122621 104 ntBASIC-2.83□□□□□ -2.86
Ccdc88bQ4QRL3 Gm26271-201ENSMUST00000158349 104 ntBASIC-2.83□□□□□ -2.86
Ccdc88bQ4QRL3 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-2.83□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24983-201ENSMUST00000104457 69 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm13801-201ENSMUST00000120750 160 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24773-201ENSMUST00000158513 99 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24080-201ENSMUST00000175178 232 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22584-201ENSMUST00000177935 92 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24306-201ENSMUST00000180229 79 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Mir3969-201ENSMUST00000197106 92 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Mir7-1-201ENSMUST00000083500 108 ntBASIC-2.84□□□□□ -2.86
Ccdc88bQ4QRL3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-2.85□□□□□ -2.87
Ccdc88bQ4QRL3 Gm23571-201ENSMUST00000180073 127 ntBASIC-2.85□□□□□ -2.87
Ccdc88bQ4QRL3 AC134601.1-201ENSMUST00000221058 109 ntBASIC-2.85□□□□□ -2.87
Ccdc88bQ4QRL3 Gm24037-201ENSMUST00000082871 180 ntBASIC-2.85□□□□□ -2.87
Ccdc88bQ4QRL3 Gm18502-201ENSMUST00000218679 199 ntBASIC-2.86□□□□□ -2.87
Ccdc88bQ4QRL3 Gm25930-201ENSMUST00000082785 107 ntBASIC-2.86□□□□□ -2.87
Ccdc88bQ4QRL3 Gm23097-201ENSMUST00000083448 105 ntBASIC-2.86□□□□□ -2.87
Ccdc88bQ4QRL3 Gm23516-201ENSMUST00000093728 107 ntBASIC-2.86□□□□□ -2.87
Ccdc88bQ4QRL3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-2.87□□□□□ -2.87
Ccdc88bQ4QRL3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-2.87□□□□□ -2.87
Ccdc88bQ4QRL3 Gm11204-201ENSMUST00000122438 147 ntBASIC-2.87□□□□□ -2.87
Ccdc88bQ4QRL3 Mir6928-201ENSMUST00000185166 70 ntBASIC-2.87□□□□□ -2.87
Ccdc88bQ4QRL3 Gm23041-201ENSMUST00000083868 106 ntBASIC-2.87□□□□□ -2.87
Ccdc88bQ4QRL3 Gm25784-201ENSMUST00000122524 81 ntBASIC-2.88□□□□□ -2.87
Ccdc88bQ4QRL3 Gm24897-201ENSMUST00000179033 107 ntBASIC-2.89□□□□□ -2.87
Ccdc88bQ4QRL3 Gm42805-201ENSMUST00000196158 276 ntBASIC-2.89□□□□□ -2.87
Ccdc88bQ4QRL3 Gm23503-201ENSMUST00000083903 107 ntBASIC-2.89□□□□□ -2.87
Ccdc88bQ4QRL3 Gm22113-201ENSMUST00000158343 104 ntBASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm22401-201ENSMUST00000174927 117 ntBASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm28330-201ENSMUST00000190353 171 ntBASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm22229-201ENSMUST00000082987 108 ntBASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm22406-201ENSMUST00000174923 93 ntBASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-2.9□□□□□ -2.87
Ccdc88bQ4QRL3 Gm22784-201ENSMUST00000104088 132 ntBASIC-2.91□□□□□ -2.88
Ccdc88bQ4QRL3 Gm22212-201ENSMUST00000158096 106 ntBASIC-2.91□□□□□ -2.88
Ccdc88bQ4QRL3 Gm24487-201ENSMUST00000178017 63 ntBASIC-2.92□□□□□ -2.88
Ccdc88bQ4QRL3 Gm25434-201ENSMUST00000158278 167 ntBASIC-2.93□□□□□ -2.88
Ccdc88bQ4QRL3 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.93□□□□□ -2.88
Ccdc88bQ4QRL3 Gm27926-201ENSMUST00000157180 66 ntBASIC-2.94□□□□□ -2.88
Ccdc88bQ4QRL3 Gm23587-201ENSMUST00000157658 84 ntBASIC-2.94□□□□□ -2.88
Ccdc88bQ4QRL3 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-2.94□□□□□ -2.88
Ccdc88bQ4QRL3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 n-R5s94-201ENSMUST00000082573 119 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm24202-201ENSMUST00000082948 103 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm22294-201ENSMUST00000083308 104 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm24275-201ENSMUST00000116780 146 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm23536-201ENSMUST00000157541 134 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm22079-201ENSMUST00000157592 106 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm23219-201ENSMUST00000158123 87 ntBASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-2.96□□□□□ -2.88
Ccdc88bQ4QRL3 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Gm23607-201ENSMUST00000104550 126 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Gm14567-201ENSMUST00000117155 174 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Gm24686-201ENSMUST00000157755 93 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25364-201ENSMUST00000158851 107 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25451-201ENSMUST00000177832 121 ntBASIC-2.97□□□□□ -2.89
Ccdc88bQ4QRL3 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.98□□□□□ -2.89
Ccdc88bQ4QRL3 Gm24867-201ENSMUST00000104161 107 ntBASIC-2.98□□□□□ -2.89
Ccdc88bQ4QRL3 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.98□□□□□ -2.89
Ccdc88bQ4QRL3 Mir1948-201ENSMUST00000157325 85 ntBASIC-2.98□□□□□ -2.89
Ccdc88bQ4QRL3 Mir3473c-201ENSMUST00000175262 81 ntBASIC-2.98□□□□□ -2.89
Ccdc88bQ4QRL3 Gm12748-201ENSMUST00000120763 504 ntBASIC-2.99□□□□□ -2.89
Ccdc88bQ4QRL3 Gm23981-201ENSMUST00000157136 106 ntBASIC-2.99□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25120-201ENSMUST00000180148 79 ntBASIC-2.99□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25184-201ENSMUST00000157753 163 ntBASIC-3□□□□□ -2.89
Ccdc88bQ4QRL3 Gm22557-201ENSMUST00000157804 102 ntBASIC-3□□□□□ -2.89
Ccdc88bQ4QRL3 Gm26084-201ENSMUST00000157903 104 ntBASIC-3□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25010-201ENSMUST00000158403 65 ntBASIC-3□□□□□ -2.89
Ccdc88bQ4QRL3 AC116589.4-201ENSMUST00000222390 216 ntBASIC-3□□□□□ -2.89
Ccdc88bQ4QRL3 Gm26487-201ENSMUST00000158022 94 ntBASIC-3.01□□□□□ -2.89
Ccdc88bQ4QRL3 Gm25670-201ENSMUST00000178423 107 ntBASIC-3.01□□□□□ -2.89
Ccdc88bQ4QRL3 Gm29665-201ENSMUST00000191457 528 ntBASIC-3.01□□□□□ -2.89
Ccdc88bQ4QRL3 Gm22686-201ENSMUST00000082847 100 ntBASIC-3.01□□□□□ -2.89
Ccdc88bQ4QRL3 Gm24292-201ENSMUST00000082888 107 ntBASIC-3.01□□□□□ -2.89
Ccdc88bQ4QRL3 Gm23500-201ENSMUST00000157735 98 ntBASIC-3.02□□□□□ -2.89
Ccdc88bQ4QRL3 Gm24453-201ENSMUST00000083346 76 ntBASIC-3.02□□□□□ -2.89
Ccdc88bQ4QRL3 Gm27715-201ENSMUST00000184714 260 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 Gm44232-201ENSMUST00000204537 225 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 Gm44563-201ENSMUST00000207958 178 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 AC154390.1-201ENSMUST00000225629 277 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 Gm22571-201ENSMUST00000082984 70 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 Gm23093-201ENSMUST00000083450 102 ntBASIC-3.03□□□□□ -2.89
Ccdc88bQ4QRL3 Gm27942-201ENSMUST00000184669 101 ntBASIC-3.03□□□□□ -2.9
Ccdc88bQ4QRL3 Mir465d-201ENSMUST00000196314 58 ntBASIC-3.03□□□□□ -2.9
Ccdc88bQ4QRL3 AC122210.2-201ENSMUST00000220216 115 ntBASIC-3.03□□□□□ -2.9
Ccdc88bQ4QRL3 Mir764-201ENSMUST00000103259 108 ntBASIC-3.04□□□□□ -2.9
Ccdc88bQ4QRL3 Gm24577-201ENSMUST00000158580 63 ntBASIC-3.05□□□□□ -2.9
Ccdc88bQ4QRL3 Gm23567-201ENSMUST00000178005 107 ntBASIC-3.05□□□□□ -2.9
Ccdc88bQ4QRL3 Gm25024-201ENSMUST00000179667 104 ntBASIC-3.05□□□□□ -2.9
Ccdc88bQ4QRL3 AC154506.3-201ENSMUST00000225417 213 ntBASIC-3.05□□□□□ -2.9
Ccdc88bQ4QRL3 Mir3473a-201ENSMUST00000175011 78 ntBASIC-3.06□□□□□ -2.9
Ccdc88bQ4QRL3 Gm27263-201ENSMUST00000184760 76 ntBASIC-3.06□□□□□ -2.9
Ccdc88bQ4QRL3 Gm42594-201ENSMUST00000199511 246 ntBASIC-3.06□□□□□ -2.9
Ccdc88bQ4QRL3 Gm7240-201ENSMUST00000220769 664 ntBASIC-3.06□□□□□ -2.9
Ccdc88bQ4QRL3 Gm25207-201ENSMUST00000093745 107 ntBASIC-3.06□□□□□ -2.9
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms