Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm24913-201ENSMUST00000157286 107 ntBASIC1.67□□□□□ -2.14
Ddb1Q3U1J4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.67□□□□□ -2.14
Ddb1Q3U1J4 Gm20409-201ENSMUST00000173457 130 ntBASIC1.67□□□□□ -2.14
Ddb1Q3U1J4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
Ddb1Q3U1J4 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.67□□□□□ -2.14
Ddb1Q3U1J4 Gm22469-201ENSMUST00000104118 133 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm22772-201ENSMUST00000104451 121 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm23763-201ENSMUST00000158345 60 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm25380-201ENSMUST00000175463 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm24641-201ENSMUST00000178055 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm25484-201ENSMUST00000178217 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm26138-201ENSMUST00000179236 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm22821-201ENSMUST00000179288 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm22638-201ENSMUST00000179674 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm27645-201ENSMUST00000183348 77 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm28862-201ENSMUST00000188246 163 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm23298-201ENSMUST00000083181 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm24614-201ENSMUST00000083269 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm22057-201ENSMUST00000083387 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm24494-201ENSMUST00000083804 81 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm25516-201ENSMUST00000083857 107 ntBASIC1.66□□□□□ -2.14
Ddb1Q3U1J4 Gm12013-201ENSMUST00000121971 155 ntBASIC1.65□□□□□ -2.15
Ddb1Q3U1J4 Gm25393-201ENSMUST00000157336 285 ntBASIC1.65□□□□□ -2.15
Ddb1Q3U1J4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.65□□□□□ -2.15
Ddb1Q3U1J4 Gm25011-201ENSMUST00000158398 126 ntBASIC1.65□□□□□ -2.15
Ddb1Q3U1J4 Gm26123-201ENSMUST00000083363 135 ntBASIC1.65□□□□□ -2.15
Ddb1Q3U1J4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm25611-201ENSMUST00000104017 133 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm25663-201ENSMUST00000157698 135 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm22914-201ENSMUST00000175195 77 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm28270-201ENSMUST00000188550 109 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm28328-201ENSMUST00000188869 109 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm37330-201ENSMUST00000192606 153 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm44462-201ENSMUST00000199696 129 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Gm45429-201ENSMUST00000209527 172 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Mir10b-201ENSMUST00000083566 68 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Snora2b-201ENSMUST00000084005 137 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.64□□□□□ -2.15
Ddb1Q3U1J4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm24468-201ENSMUST00000104489 104 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm22451-201ENSMUST00000122803 151 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Snord13-201ENSMUST00000157627 104 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm24238-201ENSMUST00000157792 98 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm22425-201ENSMUST00000158532 138 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm25650-201ENSMUST00000083784 162 ntBASIC1.63□□□□□ -2.15
Ddb1Q3U1J4 Gm22815-201ENSMUST00000157451 62 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 Gm24877-201ENSMUST00000158779 116 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 Snora41-201ENSMUST00000082668 132 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 Mir211-201ENSMUST00000083651 106 ntBASIC1.62□□□□□ -2.15
Ddb1Q3U1J4 Gm22785-201ENSMUST00000104087 132 ntBASIC1.61□□□□□ -2.15
Ddb1Q3U1J4 Gm26498-201ENSMUST00000177799 79 ntBASIC1.61□□□□□ -2.15
Ddb1Q3U1J4 Gm26230-201ENSMUST00000180141 79 ntBASIC1.61□□□□□ -2.15
Ddb1Q3U1J4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.61□□□□□ -2.15
Ddb1Q3U1J4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Ddb1Q3U1J4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ddb1Q3U1J4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.6□□□□□ -2.15
Ddb1Q3U1J4 Snord96a-201ENSMUST00000082791 81 ntBASIC1.6□□□□□ -2.15
Ddb1Q3U1J4 Snord78-201ENSMUST00000104032 66 ntBASIC1.59□□□□□ -2.15
Ddb1Q3U1J4 Gm25506-201ENSMUST00000104339 70 ntBASIC1.59□□□□□ -2.15
Ddb1Q3U1J4 Mir6377-201ENSMUST00000183760 114 ntBASIC1.59□□□□□ -2.15
Ddb1Q3U1J4 Gm27365-201ENSMUST00000184041 177 ntBASIC1.59□□□□□ -2.15
Ddb1Q3U1J4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Ddb1Q3U1J4 Gm22004-201ENSMUST00000101884 107 ntBASIC1.58□□□□□ -2.16
Ddb1Q3U1J4 Gm26253-201ENSMUST00000122493 103 ntBASIC1.58□□□□□ -2.16
Ddb1Q3U1J4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.58□□□□□ -2.16
Ddb1Q3U1J4 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.58□□□□□ -2.16
Ddb1Q3U1J4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Gm24588-201ENSMUST00000116696 83 ntBASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Gm22319-201ENSMUST00000157147 122 ntBASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Gm22963-201ENSMUST00000157960 91 ntBASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Ddb1Q3U1J4 Gm26421-201ENSMUST00000104279 132 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm24650-201ENSMUST00000157105 103 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm23351-201ENSMUST00000158427 125 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm23384-201ENSMUST00000158593 103 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Traj61-201ENSMUST00000165025 72 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm44807-201ENSMUST00000206115 154 ntBASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.56□□□□□ -2.16
Ddb1Q3U1J4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.55□□□□□ -2.16
Ddb1Q3U1J4 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.55□□□□□ -2.16
Ddb1Q3U1J4 Gm25610-201ENSMUST00000104016 129 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Gm23654-201ENSMUST00000116758 126 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Gm25753-201ENSMUST00000116792 121 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Gm25544-201ENSMUST00000122676 120 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Gm25329-201ENSMUST00000158041 126 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.54□□□□□ -2.16
Ddb1Q3U1J4 Gm11248-201ENSMUST00000119568 201 ntBASIC1.53□□□□□ -2.16
Ddb1Q3U1J4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 169.2 ms