Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Trbv25-201ENSMUST00000194700 273 ntBASIC1.67□□□□□ -2.14
Usp39Q3TIX9 Gm25899-201ENSMUST00000082672 141 ntBASIC1.67□□□□□ -2.14
Usp39Q3TIX9 Gm15654-201ENSMUST00000152660 300 ntBASIC1.66□□□□□ -2.14
Usp39Q3TIX9 Gm25011-201ENSMUST00000158398 126 ntBASIC1.66□□□□□ -2.14
Usp39Q3TIX9 Gm23917-201ENSMUST00000175256 98 ntBASIC1.66□□□□□ -2.14
Usp39Q3TIX9 Gm24523-201ENSMUST00000083965 132 ntBASIC1.66□□□□□ -2.14
Usp39Q3TIX9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Mir7679-201ENSMUST00000183379 63 ntBASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.65□□□□□ -2.15
Usp39Q3TIX9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Mir151-201ENSMUST00000083678 68 ntBASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Usp39Q3TIX9 Gm26398-201ENSMUST00000179015 127 ntBASIC1.64□□□□□ -2.15
Usp39Q3TIX9 Snord43-201ENSMUST00000199549 108 ntBASIC1.64□□□□□ -2.15
Usp39Q3TIX9 Mir1949-201ENSMUST00000157434 141 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Gm16550-201ENSMUST00000162550 126 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Mir3086-201ENSMUST00000175072 87 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Snord87-201ENSMUST00000175437 87 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Gm28256-201ENSMUST00000188953 139 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Gm28559-201ENSMUST00000190532 139 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Usp39Q3TIX9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Usp39Q3TIX9 Mir764-201ENSMUST00000103259 108 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Gm23468-201ENSMUST00000157125 108 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Gm23299-201ENSMUST00000082708 79 ntBASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Usp39Q3TIX9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm24946-201ENSMUST00000158332 106 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm24637-201ENSMUST00000158674 85 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Snora24-201ENSMUST00000174989 130 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Mir30f-201ENSMUST00000196073 92 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Mir532-201ENSMUST00000093630 96 ntBASIC1.61□□□□□ -2.15
Usp39Q3TIX9 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Gm24509-201ENSMUST00000157086 101 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Gm25358-201ENSMUST00000157189 101 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Gm22200-201ENSMUST00000158614 67 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Gm26441-201ENSMUST00000082590 104 ntBASIC1.6□□□□□ -2.15
Usp39Q3TIX9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Usp39Q3TIX9 Mir20b-201ENSMUST00000102087 80 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 Gm22605-201ENSMUST00000158289 108 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 Gm26290-201ENSMUST00000158891 145 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 Gm16307-201ENSMUST00000161269 210 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 Gm24575-201ENSMUST00000175502 77 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.59□□□□□ -2.15
Usp39Q3TIX9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.59□□□□□ -2.16
Usp39Q3TIX9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm23763-201ENSMUST00000158345 60 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm25838-201ENSMUST00000158920 120 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm20108-201ENSMUST00000219977 153 ntBASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usp39Q3TIX9 Gm26080-201ENSMUST00000104069 131 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm24183-201ENSMUST00000122572 93 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Usp39Q3TIX9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.57□□□□□ -2.16
Usp39Q3TIX9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Scarna9-201ENSMUST00000104318 70 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm22677-201ENSMUST00000116977 108 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm14039-201ENSMUST00000118705 101 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm22403-201ENSMUST00000174919 84 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm25229-201ENSMUST00000178587 79 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm25618-201ENSMUST00000179484 107 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm25635-201ENSMUST00000082675 131 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm24527-201ENSMUST00000082920 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms