Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm23989-201ENSMUST00000117030 66 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm13577-201ENSMUST00000121365 205 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm25060-201ENSMUST00000157374 130 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm25329-201ENSMUST00000158041 126 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm25797-201ENSMUST00000082640 107 ntBASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Ptchd3Q0EEE2 Gm14626-201ENSMUST00000117619 216 ntBASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 Mir7657-201ENSMUST00000196051 57 ntBASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 Gm18502-201ENSMUST00000218679 199 ntBASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.47□□□□□ -2.33
Ptchd3Q0EEE2 Gm27993-201ENSMUST00000184362 85 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Gm37330-201ENSMUST00000192606 153 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Gm43749-201ENSMUST00000199345 352 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Gm24461-201ENSMUST00000082735 103 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Gm23509-201ENSMUST00000083080 160 ntBASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Ptchd3Q0EEE2 Gm23917-201ENSMUST00000175256 98 ntBASIC0.45□□□□□ -2.34
Ptchd3Q0EEE2 Gm24106-201ENSMUST00000175498 127 ntBASIC0.45□□□□□ -2.34
Ptchd3Q0EEE2 Gm25401-201ENSMUST00000082975 106 ntBASIC0.45□□□□□ -2.34
Ptchd3Q0EEE2 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.45□□□□□ -2.34
Ptchd3Q0EEE2 Gm22469-201ENSMUST00000104118 133 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm25416-201ENSMUST00000104221 107 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Snord90-201ENSMUST00000104568 111 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm23253-201ENSMUST00000157441 104 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm10548-202ENSMUST00000165672 272 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm25300-201ENSMUST00000175284 84 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Mir7010-201ENSMUST00000183464 63 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm23301-201ENSMUST00000082713 65 ntBASIC0.44□□□□□ -2.34
Ptchd3Q0EEE2 Gm14884-201ENSMUST00000120456 196 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Gm37545-201ENSMUST00000186512 148 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Gm42935-201ENSMUST00000202004 151 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Mir377-201ENSMUST00000083504 68 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Gm24258-201ENSMUST00000083739 133 ntBASIC0.43□□□□□ -2.34
Ptchd3Q0EEE2 Mir20b-201ENSMUST00000102087 80 ntBASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 Gm23857-201ENSMUST00000158379 111 ntBASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 Gm23504-201ENSMUST00000158988 95 ntBASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 Trbv25-201ENSMUST00000194700 273 ntBASIC0.42□□□□□ -2.34
Ptchd3Q0EEE2 Mir669b-201ENSMUST00000102172 97 ntBASIC0.41□□□□□ -2.34
Ptchd3Q0EEE2 Mir100-201ENSMUST00000175270 80 ntBASIC0.41□□□□□ -2.34
Ptchd3Q0EEE2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Ptchd3Q0EEE2 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.41□□□□□ -2.34
Ptchd3Q0EEE2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Mir1191-201ENSMUST00000116883 120 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm26158-201ENSMUST00000158973 119 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.4□□□□□ -2.35
Ptchd3Q0EEE2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.39□□□□□ -2.35
Ptchd3Q0EEE2 Gm44469-201ENSMUST00000198558 79 ntBASIC0.39□□□□□ -2.35
Ptchd3Q0EEE2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm26011-201ENSMUST00000104410 104 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm12469-201ENSMUST00000117623 207 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm23672-201ENSMUST00000157471 107 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm44322-201ENSMUST00000196830 115 ntBASIC0.38□□□□□ -2.35
Ptchd3Q0EEE2 Gm26091-201ENSMUST00000122704 82 ntBASIC0.37□□□□□ -2.35
Ptchd3Q0EEE2 Gm27928-201ENSMUST00000183747 256 ntBASIC0.37□□□□□ -2.35
Ptchd3Q0EEE2 Gm44490-201ENSMUST00000198566 127 ntBASIC0.37□□□□□ -2.35
Ptchd3Q0EEE2 Gm3702-201ENSMUST00000211754 346 ntBASIC0.37□□□□□ -2.35
Ptchd3Q0EEE2 Mir200a-201ENSMUST00000083466 90 ntBASIC0.37□□□□□ -2.35
Ptchd3Q0EEE2 Gm24223-201ENSMUST00000158827 90 ntBASIC0.36□□□□□ -2.35
Ptchd3Q0EEE2 Gm26290-201ENSMUST00000158891 145 ntBASIC0.36□□□□□ -2.35
Ptchd3Q0EEE2 Mir669j-201ENSMUST00000179023 121 ntBASIC0.36□□□□□ -2.35
Ptchd3Q0EEE2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Gm26018-201ENSMUST00000104406 128 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Gm25600-201ENSMUST00000158357 106 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Mir6342-201ENSMUST00000183870 125 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Ptchd3Q0EEE2 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.34□□□□□ -2.35
Ptchd3Q0EEE2 Gm22030-201ENSMUST00000116942 63 ntBASIC0.34□□□□□ -2.36
Ptchd3Q0EEE2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms