Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir30f-201ENSMUST00000196073 92 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm25899-201ENSMUST00000082672 141 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm25854-201ENSMUST00000082792 72 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm24661-201ENSMUST00000083205 104 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm26062-201ENSMUST00000083379 107 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm22866-201ENSMUST00000083947 177 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Col8a1Q00780 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col8a1Q00780 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col8a1Q00780 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.75□□□□□ -2.13
Col8a1Q00780 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.75□□□□□ -2.13
Col8a1Q00780 Gm24523-201ENSMUST00000083965 132 ntBASIC1.75□□□□□ -2.13
Col8a1Q00780 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.75□□□□□ -2.13
Col8a1Q00780 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.75□□□□□ -2.13
Col8a1Q00780 Gm23528-201ENSMUST00000104571 132 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm24183-201ENSMUST00000122572 93 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm26478-201ENSMUST00000122611 133 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm22539-201ENSMUST00000158167 117 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Mir6369-201ENSMUST00000183772 106 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm27419-201ENSMUST00000184576 109 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.74□□□□□ -2.13
Col8a1Q00780 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm25788-201ENSMUST00000082721 131 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm25038-201ENSMUST00000082928 130 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm24412-201ENSMUST00000083426 109 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Mir221-201ENSMUST00000083488 95 ntBASIC1.74□□□□□ -2.13
Col8a1Q00780 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col8a1Q00780 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col8a1Q00780 Gm24098-201ENSMUST00000102075 109 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm25381-201ENSMUST00000102078 109 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Mir654-201ENSMUST00000104787 84 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm11333-201ENSMUST00000119479 148 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm23469-201ENSMUST00000157131 104 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm24064-201ENSMUST00000157486 106 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm25354-201ENSMUST00000179110 105 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Mir7679-201ENSMUST00000183379 63 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm20118-201ENSMUST00000187207 162 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm3724-201ENSMUST00000197957 349 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm25635-201ENSMUST00000082675 131 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Gm25402-201ENSMUST00000082966 131 ntBASIC1.73□□□□□ -2.13
Col8a1Q00780 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Col8a1Q00780 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col8a1Q00780 Gm23203-201ENSMUST00000104374 107 ntBASIC1.72□□□□□ -2.13
Col8a1Q00780 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.72□□□□□ -2.13
Col8a1Q00780 Mir6901-201ENSMUST00000185062 62 ntBASIC1.72□□□□□ -2.13
Col8a1Q00780 Mir5117-201ENSMUST00000083226 84 ntBASIC1.72□□□□□ -2.13
Col8a1Q00780 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.72□□□□□ -2.13
Col8a1Q00780 Gm14884-201ENSMUST00000120456 196 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm24509-201ENSMUST00000157086 101 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm25358-201ENSMUST00000157189 101 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm22732-201ENSMUST00000158093 121 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm26290-201ENSMUST00000158891 145 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm24495-201ENSMUST00000178575 79 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm22253-201ENSMUST00000179870 79 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Mir30d-201ENSMUST00000083503 82 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm24162-201ENSMUST00000093665 102 ntBASIC1.71□□□□□ -2.14
Col8a1Q00780 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col8a1Q00780 Gm25417-201ENSMUST00000104212 131 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm24384-201ENSMUST00000122693 75 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm25014-201ENSMUST00000158401 103 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm25838-201ENSMUST00000158920 120 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm22093-201ENSMUST00000158980 111 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Snora24-201ENSMUST00000174989 130 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Mir3086-201ENSMUST00000175072 87 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm24575-201ENSMUST00000175502 77 ntBASIC1.7□□□□□ -2.14
Col8a1Q00780 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col8a1Q00780 Gm25322-201ENSMUST00000122556 104 ntBASIC1.69□□□□□ -2.14
Col8a1Q00780 Gm24399-201ENSMUST00000157869 74 ntBASIC1.69□□□□□ -2.14
Col8a1Q00780 Gm24223-201ENSMUST00000158827 90 ntBASIC1.69□□□□□ -2.14
Col8a1Q00780 Gm22095-201ENSMUST00000158984 150 ntBASIC1.69□□□□□ -2.14
Col8a1Q00780 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Col8a1Q00780 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col8a1Q00780 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col8a1Q00780 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col8a1Q00780 Gm25992-201ENSMUST00000102437 109 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm25847-201ENSMUST00000116793 96 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm22082-201ENSMUST00000157587 161 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm24199-201ENSMUST00000157808 136 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm27326-201ENSMUST00000183504 95 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm27979-201ENSMUST00000185126 56 ntBASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col8a1Q00780 Gm24988-201ENSMUST00000104460 121 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm14039-201ENSMUST00000118705 101 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm23900-201ENSMUST00000157569 108 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm22200-201ENSMUST00000158614 67 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm23208-201ENSMUST00000158666 127 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm24366-201ENSMUST00000175383 86 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Mir6419-201ENSMUST00000184784 113 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm28256-201ENSMUST00000188953 139 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Gm28559-201ENSMUST00000190532 139 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Mir300-201ENSMUST00000083485 79 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Mir93-201ENSMUST00000083593 88 ntBASIC1.67□□□□□ -2.14
Col8a1Q00780 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
Col8a1Q00780 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms