Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm25358-201ENSMUST00000157189 101 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 Gm23558-201ENSMUST00000157823 80 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 Gm26466-201ENSMUST00000179615 79 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 Mir6351-201ENSMUST00000183826 99 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 Mir30f-201ENSMUST00000196073 92 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.62□□□□□ -2.15
Shmt1P50431 Mir410-201ENSMUST00000083563 81 ntBASIC1.62□□□□□ -2.15
Shmt1P50431 Gm22603-201ENSMUST00000157603 96 ntBASIC1.61□□□□□ -2.15
Shmt1P50431 Gm25423-201ENSMUST00000157609 107 ntBASIC1.61□□□□□ -2.15
Shmt1P50431 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.61□□□□□ -2.15
Shmt1P50431 Gm24406-201ENSMUST00000083026 128 ntBASIC1.61□□□□□ -2.15
Shmt1P50431 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.61□□□□□ -2.15
Shmt1P50431 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Shmt1P50431 Mir20b-201ENSMUST00000102087 80 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Gm22706-201ENSMUST00000157907 112 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Gm22729-201ENSMUST00000158088 129 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Gm23065-201ENSMUST00000158236 130 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Mir7241-201ENSMUST00000184532 64 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Gm25038-201ENSMUST00000082928 130 ntBASIC1.6□□□□□ -2.15
Shmt1P50431 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Shmt1P50431 Gm24222-201ENSMUST00000158834 93 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Gm22503-201ENSMUST00000158983 115 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Gm25958-201ENSMUST00000175114 71 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Gm22802-201ENSMUST00000175621 89 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Gm27493-201ENSMUST00000184128 78 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Gm26109-201ENSMUST00000083970 70 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Mir532-201ENSMUST00000093630 96 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.59□□□□□ -2.15
Shmt1P50431 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Shmt1P50431 Mir544-201ENSMUST00000103813 78 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm16307-201ENSMUST00000161269 210 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm22914-201ENSMUST00000175195 77 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm22129-201ENSMUST00000179034 107 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm20118-201ENSMUST00000187207 162 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Shmt1P50431 Gm43206-201ENSMUST00000197990 114 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Snord14a-201ENSMUST00000082807 87 ntBASIC1.58□□□□□ -2.16
Shmt1P50431 Gm26051-201ENSMUST00000104642 93 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm14039-201ENSMUST00000118705 101 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm26369-201ENSMUST00000157825 100 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm23763-201ENSMUST00000158345 60 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm24229-201ENSMUST00000158830 118 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm24575-201ENSMUST00000175502 77 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Snord50a-201ENSMUST00000178154 72 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm24463-201ENSMUST00000178417 72 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Gm27326-201ENSMUST00000183504 95 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.57□□□□□ -2.16
Shmt1P50431 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Shmt1P50431 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.56□□□□□ -2.16
Shmt1P50431 Gm23170-201ENSMUST00000157158 106 ntBASIC1.56□□□□□ -2.16
Shmt1P50431 Gm25035-201ENSMUST00000175414 77 ntBASIC1.56□□□□□ -2.16
Shmt1P50431 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Shmt1P50431 Mir7675-201ENSMUST00000184262 58 ntBASIC1.56□□□□□ -2.16
Shmt1P50431 Trbv25-201ENSMUST00000194700 273 ntBASIC1.56□□□□□ -2.16
Shmt1P50431 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.56□□□□□ -2.16
Shmt1P50431 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Shmt1P50431 Gm23766-201ENSMUST00000103894 80 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Gm23106-201ENSMUST00000157554 101 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Gm23122-201ENSMUST00000157645 103 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Gm23419-201ENSMUST00000175523 84 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Gm26398-201ENSMUST00000179015 127 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.55□□□□□ -2.16
Shmt1P50431 Gm25851-201ENSMUST00000082794 107 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Shmt1P50431 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.55□□□□□ -2.16
Shmt1P50431 Mir223-201ENSMUST00000102112 110 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Mir764-201ENSMUST00000103259 108 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm25068-201ENSMUST00000103895 110 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Scarna9-201ENSMUST00000104318 70 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm23336-201ENSMUST00000117023 123 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm22929-201ENSMUST00000175517 107 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm27365-201ENSMUST00000184041 177 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm22454-201ENSMUST00000082583 107 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 Gm22354-201ENSMUST00000083919 70 ntBASIC1.54□□□□□ -2.16
Shmt1P50431 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm23261-201ENSMUST00000158316 136 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm23349-201ENSMUST00000158432 98 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm27265-201ENSMUST00000183559 77 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Mir7665-201ENSMUST00000184907 63 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm28862-201ENSMUST00000188246 163 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm44962-201ENSMUST00000206460 279 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Snord1a-201ENSMUST00000083160 74 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm25337-201ENSMUST00000083723 104 ntBASIC1.53□□□□□ -2.16
Shmt1P50431 Gm26358-201ENSMUST00000158215 97 ntBASIC1.52□□□□□ -2.17
Shmt1P50431 Gm26290-201ENSMUST00000158891 145 ntBASIC1.52□□□□□ -2.17
Shmt1P50431 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Shmt1P50431 Gm44384-201ENSMUST00000200208 114 ntBASIC1.52□□□□□ -2.17
Shmt1P50431 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms