Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm28767-201ENSMUST00000188601 114 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Mir30f-201ENSMUST00000196073 92 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Gm25814-201ENSMUST00000082754 107 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Gm22681-201ENSMUST00000083853 106 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Gm24030-201ENSMUST00000083931 164 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Gm24579-201ENSMUST00000103964 144 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Scarna9-201ENSMUST00000104318 70 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm24246-201ENSMUST00000157315 132 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm23260-201ENSMUST00000158317 172 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Mir1933-201ENSMUST00000158930 88 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm23922-201ENSMUST00000178792 79 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm24657-201ENSMUST00000180085 79 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm22996-201ENSMUST00000180236 79 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm23678-201ENSMUST00000083157 107 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Mir33-201ENSMUST00000083531 69 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm24449-201ENSMUST00000083985 106 ntBASIC0,96□□□□□ -2,26
Ercc3P49135 Gm22689-201ENSMUST00000102452 110 ntBASIC0,95□□□□□ -2,26
Ercc3P49135 Gm14626-201ENSMUST00000117619 216 ntBASIC0,95□□□□□ -2,26
Ercc3P49135 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0,95□□□□□ -2,26
Ercc3P49135 Gm25329-201ENSMUST00000158041 126 ntBASIC0,95□□□□□ -2,26
Ercc3P49135 Gm24575-201ENSMUST00000175502 77 ntBASIC0,95□□□□□ -2,26
Ercc3P49135 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0,95□□□□□ -2,26
Ercc3P49135 Gm23347-201ENSMUST00000083823 82 ntBASIC0,95□□□□□ -2,26
Ercc3P49135 Gm23651-201ENSMUST00000116755 120 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 Gm23008-201ENSMUST00000158946 80 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 Gm20386-201ENSMUST00000174010 132 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 CT485607.2-201ENSMUST00000214650 91 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 AC164561.1-201ENSMUST00000220414 115 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 Mir30a-201ENSMUST00000083471 71 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 Snord33-201ENSMUST00000083694 84 ntBASIC0,94□□□□□ -2,26
Ercc3P49135 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0,93□□□□□ -2,26
Ercc3P49135 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0,93□□□□□ -2,26
Ercc3P49135 Gm28435-201ENSMUST00000185496 108 ntBASIC0,93□□□□□ -2,26
Ercc3P49135 Gm38113-201ENSMUST00000193704 201 ntBASIC0,93□□□□□ -2,26
Ercc3P49135 Mir362-201ENSMUST00000093592 65 ntBASIC0,93□□□□□ -2,26
Ercc3P49135 Mir500-201ENSMUST00000093600 92 ntBASIC0,93□□□□□ -2,26
Ercc3P49135 Gm22469-201ENSMUST00000104118 133 ntBASIC0,92□□□□□ -2,26
Ercc3P49135 Gm24476-201ENSMUST00000157437 131 ntBASIC0,92□□□□□ -2,26
Ercc3P49135 Gm25444-201ENSMUST00000158999 113 ntBASIC0,92□□□□□ -2,26
Ercc3P49135 Gm42935-201ENSMUST00000202004 151 ntBASIC0,92□□□□□ -2,26
Ercc3P49135 Gm43944-201ENSMUST00000205220 120 ntBASIC0,92□□□□□ -2,26
Ercc3P49135 Gm22786-201ENSMUST00000104086 122 ntBASIC0,91□□□□□ -2,26
Ercc3P49135 Mir1899-201ENSMUST00000122798 96 ntBASIC0,91□□□□□ -2,26
Ercc3P49135 Mir6390-201ENSMUST00000184405 129 ntBASIC0,91□□□□□ -2,26
Ercc3P49135 Mir101a-201ENSMUST00000083517 83 ntBASIC0,91□□□□□ -2,26
Ercc3P49135 Mir20b-201ENSMUST00000102087 80 ntBASIC0,9□□□□□ -2,27
Ercc3P49135 Gm16186-201ENSMUST00000120132 216 ntBASIC0,9□□□□□ -2,27
Ercc3P49135 Gm25544-201ENSMUST00000122676 120 ntBASIC0,9□□□□□ -2,27
Ercc3P49135 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0,9□□□□□ -2,27
Ercc3P49135 Gm22297-201ENSMUST00000083312 106 ntBASIC0,9□□□□□ -2,27
Ercc3P49135 Gm10351-201ENSMUST00000087694 125 ntBASIC0,9□□□□□ -2,27
Ercc3P49135 Gm25416-201ENSMUST00000104221 107 ntBASIC0,89□□□□□ -2,27
Ercc3P49135 Gm15289-201ENSMUST00000117793 244 ntBASIC0,89□□□□□ -2,27
Ercc3P49135 Gm25367-201ENSMUST00000158846 106 ntBASIC0,89□□□□□ -2,27
Ercc3P49135 Gm23203-201ENSMUST00000104374 107 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Gm23350-201ENSMUST00000158429 103 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Gm24678-201ENSMUST00000158756 104 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Gm23140-201ENSMUST00000082487 107 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Snord60-201ENSMUST00000082834 78 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Gm24920-201ENSMUST00000083018 85 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Gm25138-201ENSMUST00000083248 136 ntBASIC0,88□□□□□ -2,27
Ercc3P49135 Snord69-201ENSMUST00000104024 80 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm25915-201ENSMUST00000104265 126 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm13577-201ENSMUST00000121365 205 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm22451-201ENSMUST00000122803 151 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm23416-201ENSMUST00000175520 95 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0,87□□□□□ -2,27
Ercc3P49135 mt-Tm-201ENSMUST00000082395 69 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm23735-201ENSMUST00000082551 134 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm10813-201ENSMUST00000099936 90 ntBASIC0,87□□□□□ -2,27
Ercc3P49135 Gm23853-201ENSMUST00000158375 104 ntBASIC0,86□□□□□ -2,27
Ercc3P49135 Mir3109-201ENSMUST00000175301 88 ntBASIC0,86□□□□□ -2,27
Ercc3P49135 Gm36956-201ENSMUST00000193830 214 ntBASIC0,86□□□□□ -2,27
Ercc3P49135 Gm24527-201ENSMUST00000082920 107 ntBASIC0,86□□□□□ -2,27
Ercc3P49135 Gm22753-201ENSMUST00000083657 107 ntBASIC0,86□□□□□ -2,27
Ercc3P49135 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0,86□□□□□ -2,27
Ercc3P49135 Gm25091-201ENSMUST00000103997 71 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Gm23881-201ENSMUST00000116872 66 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Gm6272-201ENSMUST00000121256 171 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Gm24549-201ENSMUST00000158647 139 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Gm22466-201ENSMUST00000175278 69 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Trbv25-201ENSMUST00000194700 273 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 AC136457.1-201ENSMUST00000224195 156 ntBASIC0,85□□□□□ -2,27
Ercc3P49135 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0,84□□□□□ -2,27
Ercc3P49135 Gm25623-201ENSMUST00000157216 108 ntBASIC0,84□□□□□ -2,27
Ercc3P49135 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0,84□□□□□ -2,27
Ercc3P49135 Gm44211-201ENSMUST00000204867 145 ntBASIC0,84□□□□□ -2,27
Ercc3P49135 Gm5581-201ENSMUST00000072940 2550 ntBASIC0,84□□□□□ -2,28
Ercc3P49135 Gm22384-201ENSMUST00000158187 104 ntBASIC0,83□□□□□ -2,28
Ercc3P49135 Traj61-201ENSMUST00000165025 72 ntBASIC0,83□□□□□ -2,28
Ercc3P49135 Gm24323-201ENSMUST00000175342 77 ntBASIC0,83□□□□□ -2,28
Retrieved 100 of 76,532 protein–RNA pairs in 92,8 ms