Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm26228-201ENSMUST00000082512 107 ntBASIC-1.93□□□□□ -2.72
HttP42859 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-1.93□□□□□ -2.72
HttP42859 Gm25054-201ENSMUST00000157370 97 ntBASIC-1.93□□□□□ -2.72
HttP42859 Gm25874-201ENSMUST00000178030 79 ntBASIC-1.93□□□□□ -2.72
HttP42859 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.93□□□□□ -2.72
HttP42859 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.93□□□□□ -2.72
HttP42859 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.94□□□□□ -2.72
HttP42859 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.94□□□□□ -2.72
HttP42859 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.94□□□□□ -2.72
HttP42859 Gm22212-201ENSMUST00000158096 106 ntBASIC-1.94□□□□□ -2.72
HttP42859 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.94□□□□□ -2.72
HttP42859 Gm42805-201ENSMUST00000196158 276 ntBASIC-1.95□□□□□ -2.72
HttP42859 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-1.95□□□□□ -2.72
HttP42859 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.95□□□□□ -2.72
HttP42859 Gm23725-201ENSMUST00000177876 107 ntBASIC-1.95□□□□□ -2.72
HttP42859 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-1.95□□□□□ -2.72
HttP42859 Gm43977-201ENSMUST00000203970 189 ntBASIC-1.95□□□□□ -2.72
HttP42859 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.95□□□□□ -2.72
HttP42859 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.95□□□□□ -2.72
HttP42859 Mir691-201ENSMUST00000199719 78 ntBASIC-1.95□□□□□ -2.72
HttP42859 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.96□□□□□ -2.72
HttP42859 AC124569.1-201ENSMUST00000225932 101 ntBASIC-1.96□□□□□ -2.72
HttP42859 Mir669h-201ENSMUST00000116944 125 ntBASIC-1.96□□□□□ -2.72
HttP42859 Snord61-201ENSMUST00000083176 71 ntBASIC-1.96□□□□□ -2.72
HttP42859 Gm24983-201ENSMUST00000104457 69 ntBASIC-1.97□□□□□ -2.72
HttP42859 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.97□□□□□ -2.73
HttP42859 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25512-201ENSMUST00000083863 107 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm22089-201ENSMUST00000158336 102 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm24202-201ENSMUST00000082948 103 ntBASIC-1.98□□□□□ -2.73
HttP42859 Gm23500-201ENSMUST00000157735 98 ntBASIC-1.99□□□□□ -2.73
HttP42859 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.99□□□□□ -2.73
HttP42859 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.99□□□□□ -2.73
HttP42859 AC166358.7-201ENSMUST00000221132 108 ntBASIC-1.99□□□□□ -2.73
HttP42859 AC125543.5-201ENSMUST00000222799 108 ntBASIC-1.99□□□□□ -2.73
HttP42859 Gm23909-201ENSMUST00000104598 131 ntBASIC-2□□□□□ -2.73
HttP42859 Gm23536-201ENSMUST00000157541 134 ntBASIC-2□□□□□ -2.73
HttP42859 Gm26307-201ENSMUST00000157767 126 ntBASIC-2□□□□□ -2.73
HttP42859 Mir7670-201ENSMUST00000183689 69 ntBASIC-2□□□□□ -2.73
HttP42859 Gm23445-201ENSMUST00000082800 107 ntBASIC-2□□□□□ -2.73
HttP42859 Mir701-201ENSMUST00000102208 109 ntBASIC-2□□□□□ -2.73
HttP42859 Gm13345-201ENSMUST00000121928 228 ntBASIC-2□□□□□ -2.73
HttP42859 Gm16362-201ENSMUST00000135189 214 ntBASIC-2□□□□□ -2.73
HttP42859 Atp2b4-208ENSMUST00000167348 243 ntBASIC-2□□□□□ -2.73
HttP42859 Mir3969-201ENSMUST00000197106 92 ntBASIC-2□□□□□ -2.73
HttP42859 Gm27624-201ENSMUST00000185047 177 ntBASIC-2.01□□□□□ -2.73
HttP42859 Cfap61-214ENSMUST00000167179 183 ntBASIC-2.02□□□□□ -2.73
HttP42859 Gm18502-201ENSMUST00000218679 199 ntBASIC-2.02□□□□□ -2.73
HttP42859 Snord100-201ENSMUST00000116836 74 ntBASIC-2.02□□□□□ -2.73
HttP42859 Gm11204-201ENSMUST00000122438 147 ntBASIC-2.02□□□□□ -2.73
HttP42859 Gm25873-201ENSMUST00000180317 107 ntBASIC-2.03□□□□□ -2.73
HttP42859 Mir6411-201ENSMUST00000183556 108 ntBASIC-2.03□□□□□ -2.73
HttP42859 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-2.03□□□□□ -2.73
HttP42859 Gm22597-201ENSMUST00000157602 80 ntBASIC-2.03□□□□□ -2.73
HttP42859 Gm24877-201ENSMUST00000158779 116 ntBASIC-2.03□□□□□ -2.73
HttP42859 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-2.04□□□□□ -2.74
HttP42859 Gm43749-201ENSMUST00000199345 352 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm22571-201ENSMUST00000082984 70 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm14007-201ENSMUST00000118288 210 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm25184-201ENSMUST00000157753 163 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm25014-201ENSMUST00000158401 103 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm25364-201ENSMUST00000158851 107 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm26398-201ENSMUST00000179015 127 ntBASIC-2.04□□□□□ -2.74
HttP42859 AC154390.1-201ENSMUST00000225629 277 ntBASIC-2.04□□□□□ -2.74
HttP42859 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.05□□□□□ -2.74
HttP42859 Gm22791-201ENSMUST00000157232 145 ntBASIC-2.05□□□□□ -2.74
HttP42859 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-2.05□□□□□ -2.74
HttP42859 Gm27964-201ENSMUST00000185195 62 ntBASIC-2.06□□□□□ -2.74
HttP42859 Gm22784-201ENSMUST00000104088 132 ntBASIC-2.06□□□□□ -2.74
HttP42859 Gm22686-201ENSMUST00000082847 100 ntBASIC-2.06□□□□□ -2.74
HttP42859 Mir489-201ENSMUST00000093599 107 ntBASIC-2.06□□□□□ -2.74
HttP42859 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.07□□□□□ -2.74
HttP42859 Gm23587-201ENSMUST00000157658 84 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 76,532 protein–RNA pairs in 217.5 ms