Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm11644-201ENSMUST00000119735 150 ntBASIC0.66□□□□□ -2.3
Hoxc11P31313 Mir1899-201ENSMUST00000122798 96 ntBASIC0.66□□□□□ -2.3
Hoxc11P31313 Mir3094-201ENSMUST00000175121 64 ntBASIC0.66□□□□□ -2.3
Hoxc11P31313 Gm27289-201ENSMUST00000183341 82 ntBASIC0.66□□□□□ -2.3
Hoxc11P31313 Gm25300-201ENSMUST00000175284 84 ntBASIC0.65□□□□□ -2.31
Hoxc11P31313 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Hoxc11P31313 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.64□□□□□ -2.31
Hoxc11P31313 Gm16265-201ENSMUST00000134558 108 ntBASIC0.64□□□□□ -2.31
Hoxc11P31313 Gm24106-201ENSMUST00000175498 127 ntBASIC0.64□□□□□ -2.31
Hoxc11P31313 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Hoxc11P31313 Gm23303-201ENSMUST00000082714 152 ntBASIC0.64□□□□□ -2.31
Hoxc11P31313 Gm22469-201ENSMUST00000104118 133 ntBASIC0.63□□□□□ -2.31
Hoxc11P31313 Gm13577-201ENSMUST00000121365 205 ntBASIC0.63□□□□□ -2.31
Hoxc11P31313 Mir7010-201ENSMUST00000183464 63 ntBASIC0.63□□□□□ -2.31
Hoxc11P31313 Mir6389-201ENSMUST00000183661 102 ntBASIC0.63□□□□□ -2.31
Hoxc11P31313 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.63□□□□□ -2.31
Hoxc11P31313 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Hoxc11P31313 Snord90-201ENSMUST00000104568 111 ntBASIC0.62□□□□□ -2.31
Hoxc11P31313 Gm23881-201ENSMUST00000116872 66 ntBASIC0.62□□□□□ -2.31
Hoxc11P31313 Mir100-201ENSMUST00000175270 80 ntBASIC0.62□□□□□ -2.31
Hoxc11P31313 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.62□□□□□ -2.31
Hoxc11P31313 Gm44469-201ENSMUST00000198558 79 ntBASIC0.62□□□□□ -2.31
Hoxc11P31313 Gm23947-201ENSMUST00000093636 107 ntBASIC0.62□□□□□ -2.31
Hoxc11P31313 Gm26484-201ENSMUST00000158018 106 ntBASIC0.61□□□□□ -2.31
Hoxc11P31313 Gm25329-201ENSMUST00000158041 126 ntBASIC0.61□□□□□ -2.31
Hoxc11P31313 Gm23445-201ENSMUST00000082800 107 ntBASIC0.61□□□□□ -2.31
Hoxc11P31313 Gm26158-201ENSMUST00000158973 119 ntBASIC0.6□□□□□ -2.31
Hoxc11P31313 Gm10548-202ENSMUST00000165672 272 ntBASIC0.6□□□□□ -2.31
Hoxc11P31313 Gm23509-201ENSMUST00000083080 160 ntBASIC0.6□□□□□ -2.31
Hoxc11P31313 Gm10172-201ENSMUST00000085929 558 ntBASIC0.6□□□□□ -2.31
Hoxc11P31313 Gm14884-201ENSMUST00000120456 196 ntBASIC0.59□□□□□ -2.31
Hoxc11P31313 Gm24500-201ENSMUST00000158447 124 ntBASIC0.59□□□□□ -2.31
Hoxc11P31313 Gm42935-201ENSMUST00000202004 151 ntBASIC0.59□□□□□ -2.31
Hoxc11P31313 Gm18502-201ENSMUST00000218679 199 ntBASIC0.59□□□□□ -2.31
Hoxc11P31313 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.59□□□□□ -2.31
Hoxc11P31313 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Hoxc11P31313 Gm23126-201ENSMUST00000104260 134 ntBASIC0.58□□□□□ -2.32
Hoxc11P31313 Gm12469-201ENSMUST00000117623 207 ntBASIC0.58□□□□□ -2.32
Hoxc11P31313 Gm27928-201ENSMUST00000183747 256 ntBASIC0.58□□□□□ -2.32
Hoxc11P31313 Trbv25-201ENSMUST00000194700 273 ntBASIC0.58□□□□□ -2.32
Hoxc11P31313 Gm43749-201ENSMUST00000199345 352 ntBASIC0.58□□□□□ -2.32
Hoxc11P31313 Mir1191-201ENSMUST00000116883 120 ntBASIC0.57□□□□□ -2.32
Hoxc11P31313 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.57□□□□□ -2.32
Hoxc11P31313 Mir6481-201ENSMUST00000184617 110 ntBASIC0.57□□□□□ -2.32
Hoxc11P31313 Gm44322-201ENSMUST00000196830 115 ntBASIC0.57□□□□□ -2.32
Hoxc11P31313 Gm25797-201ENSMUST00000082640 107 ntBASIC0.57□□□□□ -2.32
Hoxc11P31313 Gm26011-201ENSMUST00000104410 104 ntBASIC0.56□□□□□ -2.32
Hoxc11P31313 Gm23321-201ENSMUST00000104465 126 ntBASIC0.56□□□□□ -2.32
Hoxc11P31313 Gm23917-201ENSMUST00000175256 98 ntBASIC0.56□□□□□ -2.32
Hoxc11P31313 Gm22302-201ENSMUST00000082657 106 ntBASIC0.56□□□□□ -2.32
Hoxc11P31313 Gm24461-201ENSMUST00000082735 103 ntBASIC0.56□□□□□ -2.32
Hoxc11P31313 Gm25060-201ENSMUST00000157374 130 ntBASIC0.55□□□□□ -2.32
Hoxc11P31313 Gm24963-201ENSMUST00000157916 144 ntBASIC0.55□□□□□ -2.32
Hoxc11P31313 Gm23857-201ENSMUST00000158379 111 ntBASIC0.55□□□□□ -2.32
Hoxc11P31313 Mir200a-201ENSMUST00000083466 90 ntBASIC0.55□□□□□ -2.32
Hoxc11P31313 Gm24258-201ENSMUST00000083739 133 ntBASIC0.55□□□□□ -2.32
Hoxc11P31313 Gm23253-201ENSMUST00000157441 104 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Gm23504-201ENSMUST00000158988 95 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Gm26236-201ENSMUST00000175536 137 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Gm26398-201ENSMUST00000179015 127 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Mir219b-201ENSMUST00000198317 65 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Gm23347-201ENSMUST00000083823 82 ntBASIC0.54□□□□□ -2.32
Hoxc11P31313 Mir669b-201ENSMUST00000102172 97 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Gm23988-201ENSMUST00000117034 122 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Gm26285-201ENSMUST00000177923 107 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Gm43432-201ENSMUST00000196352 121 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Gm23622-201ENSMUST00000082460 107 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Mir377-201ENSMUST00000083504 68 ntBASIC0.53□□□□□ -2.32
Hoxc11P31313 Gm26018-201ENSMUST00000104406 128 ntBASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm23605-201ENSMUST00000157255 127 ntBASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm24223-201ENSMUST00000158827 90 ntBASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm25693-201ENSMUST00000175443 85 ntBASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm27699-201ENSMUST00000183553 180 ntBASIC0.52□□□□□ -2.33
Hoxc11P31313 Gm25393-201ENSMUST00000157336 285 ntBASIC0.51□□□□□ -2.33
Hoxc11P31313 Gm22541-201ENSMUST00000158165 127 ntBASIC0.51□□□□□ -2.33
Hoxc11P31313 Gm26290-201ENSMUST00000158891 145 ntBASIC0.51□□□□□ -2.33
Hoxc11P31313 Gm22911-201ENSMUST00000177920 107 ntBASIC0.51□□□□□ -2.33
Hoxc11P31313 Gm3702-201ENSMUST00000211754 346 ntBASIC0.51□□□□□ -2.33
Hoxc11P31313 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
Hoxc11P31313 Gm24683-201ENSMUST00000104840 88 ntBASIC0.5□□□□□ -2.33
Hoxc11P31313 Gm24246-201ENSMUST00000157315 132 ntBASIC0.5□□□□□ -2.33
Hoxc11P31313 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.5□□□□□ -2.33
Hoxc11P31313 Gm25787-201ENSMUST00000104709 92 ntBASIC0.49□□□□□ -2.33
Hoxc11P31313 Gm26091-201ENSMUST00000122704 82 ntBASIC0.49□□□□□ -2.33
Hoxc11P31313 Gm24718-201ENSMUST00000157521 136 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms