Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm27475-201ENSMUST00000183420 61 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm27943-201ENSMUST00000184844 116 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Mir7065-201ENSMUST00000185110 61 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm44922-201ENSMUST00000206690 90 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.23□□□□□ -2.37
Cd40lgP27548 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm23708-201ENSMUST00000104367 123 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Gm18665-201ENSMUST00000189783 270 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Gm37624-201ENSMUST00000193751 219 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Mir7229-201ENSMUST00000197062 53 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Gm42623-201ENSMUST00000197225 379 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Mir6896-201ENSMUST00000198033 73 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 Gm23461-201ENSMUST00000083265 107 ntBASIC0.22□□□□□ -2.37
Cd40lgP27548 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.21□□□□□ -2.38
Cd40lgP27548 Gm25329-201ENSMUST00000158041 126 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Gm22541-201ENSMUST00000158165 127 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Gm22989-201ENSMUST00000158313 86 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Gm26403-201ENSMUST00000158500 105 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Trbv25-201ENSMUST00000194700 273 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Snord61-201ENSMUST00000083176 71 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.21□□□□□ -2.38
Cd40lgP27548 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Cd40lgP27548 Mir1298-201ENSMUST00000116681 98 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 Mir1191-201ENSMUST00000116883 120 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 Gm27803-201ENSMUST00000183763 119 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 Mir6342-201ENSMUST00000183870 125 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 Gm27792-201ENSMUST00000184031 115 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.2□□□□□ -2.38
Cd40lgP27548 Gm23320-201ENSMUST00000104462 127 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm14837-201ENSMUST00000119688 206 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Scarna8-201ENSMUST00000158333 131 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm25693-201ENSMUST00000175443 85 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm22348-201ENSMUST00000178674 79 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm44455-201ENSMUST00000200061 82 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm42935-201ENSMUST00000202004 151 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.19□□□□□ -2.38
Cd40lgP27548 Gm23531-201ENSMUST00000104567 68 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Mir3094-201ENSMUST00000175121 64 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Gm24321-201ENSMUST00000175348 80 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Mir21b-201ENSMUST00000184317 108 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Gm29535-201ENSMUST00000185723 109 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Gm28143-201ENSMUST00000191082 109 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Gm25894-201ENSMUST00000083458 75 ntBASIC0.18□□□□□ -2.38
Cd40lgP27548 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.18□□□□□ -2.38
Cd40lgP27548 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Cd40lgP27548 Gm24278-201ENSMUST00000104239 127 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Gm25315-201ENSMUST00000116823 121 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Gm22030-201ENSMUST00000116942 63 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Gm16186-201ENSMUST00000120132 216 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Mir1949-202ENSMUST00000199259 70 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Gm23423-201ENSMUST00000082782 106 ntBASIC0.17□□□□□ -2.38
Cd40lgP27548 Mir670-201ENSMUST00000102380 100 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm24833-201ENSMUST00000116775 120 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm24290-201ENSMUST00000157634 96 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm22967-201ENSMUST00000157956 239 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm22088-201ENSMUST00000158341 117 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm23180-201ENSMUST00000158686 125 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm27607-201ENSMUST00000185162 122 ntBASIC0.16□□□□□ -2.38
Cd40lgP27548 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.16□□□□□ -2.38
Cd40lgP27548 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.15□□□□□ -2.38
Cd40lgP27548 Gm44489-201ENSMUST00000104619 97 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Gm22105-201ENSMUST00000116734 116 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Gm23994-201ENSMUST00000158059 88 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Gm24129-201ENSMUST00000158537 97 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Mir3105-201ENSMUST00000175480 85 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Gm26097-201ENSMUST00000179642 93 ntBASIC0.15□□□□□ -2.39
Cd40lgP27548 Gm13065-201ENSMUST00000119178 141 ntBASIC0.14□□□□□ -2.39
Cd40lgP27548 Gm25980-201ENSMUST00000157176 218 ntBASIC0.14□□□□□ -2.39
Cd40lgP27548 Gm24223-201ENSMUST00000158827 90 ntBASIC0.14□□□□□ -2.39
Cd40lgP27548 Mir3108-201ENSMUST00000175500 79 ntBASIC0.14□□□□□ -2.39
Cd40lgP27548 Mir376b-201ENSMUST00000195930 82 ntBASIC0.14□□□□□ -2.39
Cd40lgP27548 Gm22606-201ENSMUST00000158290 103 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Gm25600-201ENSMUST00000158357 106 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Gm17020-201ENSMUST00000172274 274 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Gm26398-201ENSMUST00000179015 127 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Gm27694-201ENSMUST00000184740 86 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Gm23303-201ENSMUST00000082714 152 ntBASIC0.13□□□□□ -2.39
Cd40lgP27548 Mir669f-201ENSMUST00000103850 121 ntBASIC0.12□□□□□ -2.39
Cd40lgP27548 Gm26290-201ENSMUST00000158891 145 ntBASIC0.12□□□□□ -2.39
Cd40lgP27548 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.12□□□□□ -2.39
Cd40lgP27548 Gm25040-201ENSMUST00000103877 66 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm25408-201ENSMUST00000104104 133 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm11644-201ENSMUST00000119735 150 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms