Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.63□□□□□ -2.31
Msh3P13705 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.63□□□□□ -2.31
Msh3P13705 Mir448-201ENSMUST00000083516 112 ntBASIC0.63□□□□□ -2.31
Msh3P13705 Gm23989-201ENSMUST00000117030 66 ntBASIC0.62□□□□□ -2.31
Msh3P13705 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.62□□□□□ -2.31
Msh3P13705 Gm37330-201ENSMUST00000192606 153 ntBASIC0.62□□□□□ -2.31
Msh3P13705 Gm22302-201ENSMUST00000082657 106 ntBASIC0.62□□□□□ -2.31
Msh3P13705 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm6985-201ENSMUST00000121255 271 ntBASIC0.61□□□□□ -2.31
Msh3P13705 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm26091-201ENSMUST00000122704 82 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm10548-202ENSMUST00000165672 272 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm24323-201ENSMUST00000175342 77 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Trbv25-201ENSMUST00000194700 273 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm2077-201ENSMUST00000195017 319 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Msh3P13705 Gm42506-201ENSMUST00000202009 150 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm25081-201ENSMUST00000082534 108 ntBASIC0.61□□□□□ -2.31
Msh3P13705 Gm22003-201ENSMUST00000101885 107 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm24263-201ENSMUST00000104059 107 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm26236-201ENSMUST00000175536 137 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm23410-201ENSMUST00000179967 107 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm22756-201ENSMUST00000180118 107 ntBASIC0.6□□□□□ -2.31
Msh3P13705 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.6□□□□□ -2.31
Msh3P13705 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm23301-201ENSMUST00000082713 65 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm22505-201ENSMUST00000082956 108 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm22363-201ENSMUST00000083100 108 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm23814-201ENSMUST00000083230 102 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm23095-201ENSMUST00000083446 107 ntBASIC0.6□□□□□ -2.31
Msh3P13705 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.59□□□□□ -2.31
Msh3P13705 Gm24141-201ENSMUST00000122776 115 ntBASIC0.59□□□□□ -2.31
Msh3P13705 Gm24246-201ENSMUST00000157315 132 ntBASIC0.59□□□□□ -2.31
Msh3P13705 Gm24718-201ENSMUST00000157521 136 ntBASIC0.59□□□□□ -2.31
Msh3P13705 Gm44469-201ENSMUST00000198558 79 ntBASIC0.59□□□□□ -2.31
Msh3P13705 Mir1191-201ENSMUST00000116883 120 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm26084-201ENSMUST00000157903 104 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm23857-201ENSMUST00000158379 111 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm26158-201ENSMUST00000158973 119 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm23917-201ENSMUST00000175256 98 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Mir669j-201ENSMUST00000179023 121 ntBASIC0.58□□□□□ -2.32
Msh3P13705 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm24920-201ENSMUST00000083018 85 ntBASIC0.58□□□□□ -2.32
Msh3P13705 Gm12469-201ENSMUST00000117623 207 ntBASIC0.57□□□□□ -2.32
Msh3P13705 Mir100-201ENSMUST00000175270 80 ntBASIC0.57□□□□□ -2.32
Msh3P13705 Mir6394-201ENSMUST00000184738 99 ntBASIC0.57□□□□□ -2.32
Msh3P13705 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.57□□□□□ -2.32
Msh3P13705 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.57□□□□□ -2.32
Msh3P13705 Gm26412-201ENSMUST00000157666 55 ntBASIC0.56□□□□□ -2.32
Msh3P13705 Gm23722-201ENSMUST00000083002 130 ntBASIC0.56□□□□□ -2.32
Msh3P13705 Mir10b-201ENSMUST00000083566 68 ntBASIC0.56□□□□□ -2.32
Msh3P13705 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.55□□□□□ -2.32
Msh3P13705 Gm23991-201ENSMUST00000117033 93 ntBASIC0.55□□□□□ -2.32
Msh3P13705 Gm24717-201ENSMUST00000157522 124 ntBASIC0.55□□□□□ -2.32
Msh3P13705 Gm24223-201ENSMUST00000158827 90 ntBASIC0.55□□□□□ -2.32
Msh3P13705 Mir7010-201ENSMUST00000183464 63 ntBASIC0.55□□□□□ -2.32
Msh3P13705 Mir377-201ENSMUST00000083504 68 ntBASIC0.55□□□□□ -2.32
Msh3P13705 Gm11248-201ENSMUST00000119568 201 ntBASIC0.54□□□□□ -2.32
Msh3P13705 Gm43432-201ENSMUST00000196352 121 ntBASIC0.54□□□□□ -2.32
Msh3P13705 Gm44458-201ENSMUST00000196594 143 ntBASIC0.54□□□□□ -2.32
Msh3P13705 Gm45492-201ENSMUST00000211611 288 ntBASIC0.54□□□□□ -2.32
Msh3P13705 Gm22349-201ENSMUST00000157864 107 ntBASIC0.53□□□□□ -2.32
Msh3P13705 Gm17528-201ENSMUST00000171026 239 ntBASIC0.53□□□□□ -2.32
Msh3P13705 Gm26398-201ENSMUST00000179015 127 ntBASIC0.53□□□□□ -2.32
Msh3P13705 Mir6985-201ENSMUST00000184641 61 ntBASIC0.53□□□□□ -2.32
Msh3P13705 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
Msh3P13705 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Msh3P13705 Gm23605-201ENSMUST00000157255 127 ntBASIC0.52□□□□□ -2.33
Msh3P13705 Gm22966-201ENSMUST00000157957 129 ntBASIC0.52□□□□□ -2.33
Msh3P13705 Gm25300-201ENSMUST00000175284 84 ntBASIC0.52□□□□□ -2.33
Msh3P13705 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.52□□□□□ -2.33
Msh3P13705 Gm22469-201ENSMUST00000104118 133 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm14884-201ENSMUST00000120456 196 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm22451-201ENSMUST00000122803 151 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm26484-201ENSMUST00000158018 106 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm25367-201ENSMUST00000158846 106 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Traj61-201ENSMUST00000165025 72 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm44470-201ENSMUST00000203913 142 ntBASIC0.51□□□□□ -2.33
Msh3P13705 Gm22030-201ENSMUST00000116942 63 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm23260-201ENSMUST00000158317 172 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm26290-201ENSMUST00000158891 145 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm25693-201ENSMUST00000175443 85 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm22775-201ENSMUST00000177630 120 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm23569-201ENSMUST00000180120 120 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Mir6389-201ENSMUST00000183661 102 ntBASIC0.5□□□□□ -2.33
Msh3P13705 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm22681-201ENSMUST00000083853 106 ntBASIC0.5□□□□□ -2.33
Msh3P13705 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Msh3P13705 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.49□□□□□ -2.33
Msh3P13705 Gm25091-201ENSMUST00000103997 71 ntBASIC0.49□□□□□ -2.33
Msh3P13705 Gm24290-201ENSMUST00000157634 96 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms