Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2,41□□□□□ -2,02
Msx1P13297 Gm24378-201ENSMUST00000122699 106 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Mir1949-201ENSMUST00000157434 141 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Gm25901-201ENSMUST00000158494 130 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Gm25994-201ENSMUST00000175392 101 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Gm22264-201ENSMUST00000178200 107 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Gm25870-201ENSMUST00000179845 79 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Gm27369-201ENSMUST00000185182 71 ntBASIC2,4□□□□□ -2,03
Msx1P13297 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2,4□□□□□ -2,03
Msx1P13297 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2,4□□□□□ -2,03
Msx1P13297 Gm24588-201ENSMUST00000116696 83 ntBASIC2,39□□□□□ -2,03
Msx1P13297 Mir1899-201ENSMUST00000122798 96 ntBASIC2,39□□□□□ -2,03
Msx1P13297 Snord87-201ENSMUST00000175437 87 ntBASIC2,39□□□□□ -2,03
Msx1P13297 Mir3569-201ENSMUST00000185080 58 ntBASIC2,39□□□□□ -2,03
Msx1P13297 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2,38□□□□□ -2,03
Msx1P13297 Mir92-1-201ENSMUST00000102108 80 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm24670-201ENSMUST00000104154 132 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm26341-201ENSMUST00000104561 134 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm24396-201ENSMUST00000116905 93 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Mir3057-201ENSMUST00000175040 91 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm22914-201ENSMUST00000175195 77 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm27399-201ENSMUST00000184250 78 ntBASIC2,38□□□□□ -2,03
Msx1P13297 Gm24401-201ENSMUST00000157868 91 ntBASIC2,37□□□□□ -2,03
Msx1P13297 Gm22403-201ENSMUST00000174919 84 ntBASIC2,37□□□□□ -2,03
Msx1P13297 Mir7241-201ENSMUST00000184532 64 ntBASIC2,37□□□□□ -2,03
Msx1P13297 Mir509-201ENSMUST00000196089 75 ntBASIC2,37□□□□□ -2,03
Msx1P13297 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2,37□□□□□ -2,03
Msx1P13297 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2,37□□□□□ -2,03
Msx1P13297 Gm23600-201ENSMUST00000157260 71 ntBASIC2,36□□□□□ -2,03
Msx1P13297 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2,36□□□□□ -2,03
Msx1P13297 Gm22544-201ENSMUST00000104349 127 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm24648-201ENSMUST00000157111 132 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm25964-201ENSMUST00000157171 97 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm22887-201ENSMUST00000178586 107 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2,35□□□□□ -2,03
Msx1P13297 Gm23306-201ENSMUST00000179058 105 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Mir7226-201ENSMUST00000184953 60 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm44477-201ENSMUST00000199661 110 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Gm44555-201ENSMUST00000209008 148 ntBASIC2,35□□□□□ -2,03
Msx1P13297 AC158537.2-201ENSMUST00000223575 150 ntBASIC2,35□□□□□ -2,03
Msx1P13297 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Gm26712-201ENSMUST00000180813 217 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Mir6925-201ENSMUST00000197857 70 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Snord60-201ENSMUST00000082834 78 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Gm24406-201ENSMUST00000083026 128 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Mir93-201ENSMUST00000083593 88 ntBASIC2,34□□□□□ -2,03
Msx1P13297 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2,33□□□□□ -2,04
Msx1P13297 Mir3061-201ENSMUST00000175129 91 ntBASIC2,33□□□□□ -2,04
Msx1P13297 Gm43927-201ENSMUST00000204599 117 ntBASIC2,33□□□□□ -2,04
Msx1P13297 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2,33□□□□□ -2,04
Msx1P13297 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2,33□□□□□ -2,04
Msx1P13297 Gm37895-201ENSMUST00000192448 4550 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Gm22486-201ENSMUST00000116815 137 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Gm12469-201ENSMUST00000117623 207 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Gm23048-201ENSMUST00000157237 129 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Gm24436-201ENSMUST00000157889 302 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Mir107-201ENSMUST00000083660 87 ntBASIC2,32□□□□□ -2,04
Msx1P13297 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2,32□□□□□ -2,04
Msx1P13297 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2,31□□□□□ -2,04
Msx1P13297 Gm24728-201ENSMUST00000158226 125 ntBASIC2,31□□□□□ -2,04
Msx1P13297 Gm22802-201ENSMUST00000175621 89 ntBASIC2,31□□□□□ -2,04
Msx1P13297 Mir6406-201ENSMUST00000183592 120 ntBASIC2,31□□□□□ -2,04
Msx1P13297 Snord104-201ENSMUST00000083192 70 ntBASIC2,31□□□□□ -2,04
Msx1P13297 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2,31□□□□□ -2,04
Msx1P13297 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2,3□□□□□ -2,04
Msx1P13297 Gm23766-201ENSMUST00000103894 80 ntBASIC2,3□□□□□ -2,04
Msx1P13297 Gm25609-201ENSMUST00000104019 104 ntBASIC2,3□□□□□ -2,04
Msx1P13297 Mir344e-201ENSMUST00000104677 66 ntBASIC2,3□□□□□ -2,04
Msx1P13297 Gm23881-201ENSMUST00000116872 66 ntBASIC2,3□□□□□ -2,04
Msx1P13297 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2,29□□□□□ -2,04
Msx1P13297 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2,29□□□□□ -2,04
Msx1P13297 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2,29□□□□□ -2,04
Msx1P13297 Snora36b-201ENSMUST00000104383 132 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm23661-201ENSMUST00000122630 87 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm25113-201ENSMUST00000157185 143 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm24212-201ENSMUST00000158258 132 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2,29□□□□□ -2,04
Msx1P13297 Mir3064-201ENSMUST00000175532 67 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm38295-201ENSMUST00000191951 151 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm43865-201ENSMUST00000204721 127 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Mir322-201ENSMUST00000083484 95 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Gm22866-201ENSMUST00000083947 177 ntBASIC2,29□□□□□ -2,04
Msx1P13297 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2,29□□□□□ -2,04
Msx1P13297 Gm22752-201ENSMUST00000102083 109 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm24475-201ENSMUST00000157435 143 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm23670-201ENSMUST00000157469 119 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm23477-201ENSMUST00000158882 128 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm27544-201ENSMUST00000185069 155 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm25820-201ENSMUST00000198589 127 ntBASIC2,28□□□□□ -2,04
Msx1P13297 AC160550.1-201ENSMUST00000228659 181 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm25636-201ENSMUST00000082666 133 ntBASIC2,28□□□□□ -2,04
Msx1P13297 Gm25619-201ENSMUST00000122621 104 ntBASIC2,27□□□□□ -2,05
Msx1P13297 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2,27□□□□□ -2,05
Msx1P13297 Gm25552-201ENSMUST00000158081 91 ntBASIC2,27□□□□□ -2,05
Msx1P13297 Mir6997-201ENSMUST00000184313 71 ntBASIC2,27□□□□□ -2,05
Msx1P13297 Mir7017-201ENSMUST00000184894 62 ntBASIC2,27□□□□□ -2,05
Msx1P13297 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2,27□□□□□ -2,05
Msx1P13297 Gm25622-201ENSMUST00000157217 104 ntBASIC2,26□□□□□ -2,05
Msx1P13297 Gm23033-201ENSMUST00000157996 134 ntBASIC2,26□□□□□ -2,05
Msx1P13297 Gm22803-201ENSMUST00000158049 283 ntBASIC2,26□□□□□ -2,05
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms