Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Snord85-201ENSMUST00000083262 73 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.15□□□□□ -2.43
Lire1P11260 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.15□□□□□ -2.43
Lire1P11260 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.15□□□□□ -2.43
Lire1P11260 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.15□□□□□ -2.43
Lire1P11260 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.15□□□□□ -2.43
Lire1P11260 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Lire1P11260 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Mir18-201ENSMUST00000083469 96 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.16□□□□□ -2.44
Lire1P11260 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.17□□□□□ -2.44
Lire1P11260 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.17□□□□□ -2.44
Lire1P11260 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.17□□□□□ -2.44
Lire1P11260 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.17□□□□□ -2.44
Lire1P11260 Mir201-201ENSMUST00000083470 66 ntBASIC-0.17□□□□□ -2.44
Lire1P11260 Mir672-201ENSMUST00000102331 100 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.18□□□□□ -2.44
Lire1P11260 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Lire1P11260 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.19□□□□□ -2.44
Lire1P11260 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.19□□□□□ -2.44
Lire1P11260 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.19□□□□□ -2.44
Lire1P11260 Snora75-201ENSMUST00000082903 133 ntBASIC-0.19□□□□□ -2.44
Lire1P11260 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.2□□□□□ -2.44
Lire1P11260 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.2□□□□□ -2.44
Lire1P11260 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.2□□□□□ -2.44
Lire1P11260 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.2□□□□□ -2.44
Lire1P11260 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.2□□□□□ -2.44
Lire1P11260 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Mir214-201ENSMUST00000083582 110 ntBASIC-0.21□□□□□ -2.44
Lire1P11260 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.22□□□□□ -2.44
Lire1P11260 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.22□□□□□ -2.44
Lire1P11260 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.22□□□□□ -2.44
Lire1P11260 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.22□□□□□ -2.44
Lire1P11260 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.22□□□□□ -2.44
Lire1P11260 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.23□□□□□ -2.45
Lire1P11260 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
Lire1P11260 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.24□□□□□ -2.45
Lire1P11260 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Snora15-201ENSMUST00000177461 131 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.25□□□□□ -2.45
Lire1P11260 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.26□□□□□ -2.45
Lire1P11260 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.27□□□□□ -2.45
Lire1P11260 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.28□□□□□ -2.45
Lire1P11260 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.28□□□□□ -2.45
Lire1P11260 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms