Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm18433-201ENSMUST00000192747 197 ntBASIC1.76□□□□□ -2.13
Vti1aO89116 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.76□□□□□ -2.13
Vti1aO89116 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.75□□□□□ -2.13
Vti1aO89116 Gm15115-201ENSMUST00000121145 264 ntBASIC1.75□□□□□ -2.13
Vti1aO89116 Gm23986-201ENSMUST00000157144 63 ntBASIC1.75□□□□□ -2.13
Vti1aO89116 Mir468-201ENSMUST00000197332 78 ntBASIC1.75□□□□□ -2.13
Vti1aO89116 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.75□□□□□ -2.13
Vti1aO89116 Mir20b-201ENSMUST00000102087 80 ntBASIC1.74□□□□□ -2.13
Vti1aO89116 Gm22845-201ENSMUST00000157712 104 ntBASIC1.74□□□□□ -2.13
Vti1aO89116 Gm22944-201ENSMUST00000158662 133 ntBASIC1.74□□□□□ -2.13
Vti1aO89116 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Vti1aO89116 Gm22785-201ENSMUST00000104087 132 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm26358-201ENSMUST00000158215 97 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm27326-201ENSMUST00000183504 95 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm28794-201ENSMUST00000185276 136 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm20118-201ENSMUST00000187207 162 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm28383-201ENSMUST00000187563 139 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm44948-201ENSMUST00000209050 149 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Gm24165-201ENSMUST00000082718 128 ntBASIC1.73□□□□□ -2.13
Vti1aO89116 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Vti1aO89116 Mir802-201ENSMUST00000103258 97 ntBASIC1.72□□□□□ -2.13
Vti1aO89116 Gm23601-201ENSMUST00000157259 131 ntBASIC1.72□□□□□ -2.13
Vti1aO89116 Gm22887-201ENSMUST00000178586 107 ntBASIC1.72□□□□□ -2.13
Vti1aO89116 Snord96a-201ENSMUST00000082791 81 ntBASIC1.72□□□□□ -2.13
Vti1aO89116 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Vti1aO89116 Gm24588-201ENSMUST00000116696 83 ntBASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm44396-201ENSMUST00000199843 114 ntBASIC1.71□□□□□ -2.14
Vti1aO89116 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Vti1aO89116 Gm22089-201ENSMUST00000158336 102 ntBASIC1.7□□□□□ -2.14
Vti1aO89116 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.7□□□□□ -2.14
Vti1aO89116 Gm27248-201ENSMUST00000184004 166 ntBASIC1.7□□□□□ -2.14
Vti1aO89116 Trbv25-201ENSMUST00000194700 273 ntBASIC1.7□□□□□ -2.14
Vti1aO89116 Gm24524-201ENSMUST00000082925 170 ntBASIC1.7□□□□□ -2.14
Vti1aO89116 Mir320-201ENSMUST00000083594 82 ntBASIC1.7□□□□□ -2.14
Vti1aO89116 Snord13-201ENSMUST00000157627 104 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Gm26181-201ENSMUST00000157687 106 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Gm25958-201ENSMUST00000175114 71 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Gm28767-201ENSMUST00000188601 114 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Gm43977-201ENSMUST00000203970 189 ntBASIC1.69□□□□□ -2.14
Vti1aO89116 Gm25393-201ENSMUST00000157336 285 ntBASIC1.68□□□□□ -2.14
Vti1aO89116 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
Vti1aO89116 Gm25370-201ENSMUST00000158159 94 ntBASIC1.68□□□□□ -2.14
Vti1aO89116 Mir6351-201ENSMUST00000183826 99 ntBASIC1.68□□□□□ -2.14
Vti1aO89116 Mir1899-201ENSMUST00000122798 96 ntBASIC1.67□□□□□ -2.14
Vti1aO89116 Gm26290-201ENSMUST00000158891 145 ntBASIC1.67□□□□□ -2.14
Vti1aO89116 Snord80-201ENSMUST00000083801 81 ntBASIC1.67□□□□□ -2.14
Vti1aO89116 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.67□□□□□ -2.14
Vti1aO89116 Mir764-201ENSMUST00000103259 108 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Gm23122-201ENSMUST00000157645 103 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Gm22963-201ENSMUST00000157960 91 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Gm23065-201ENSMUST00000158236 130 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Gm25976-201ENSMUST00000158695 130 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Traj60-201ENSMUST00000167781 54 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.66□□□□□ -2.14
Vti1aO89116 Gm26369-201ENSMUST00000157825 100 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Gm24728-201ENSMUST00000158226 125 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Gm23114-201ENSMUST00000158478 117 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Mir1961-201ENSMUST00000158643 112 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Mir7665-201ENSMUST00000184907 63 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.65□□□□□ -2.15
Vti1aO89116 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Vti1aO89116 Mir1191-201ENSMUST00000116883 120 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm23558-201ENSMUST00000157823 80 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm24401-201ENSMUST00000157868 91 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm24223-201ENSMUST00000158827 90 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm26398-201ENSMUST00000179015 127 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm44962-201ENSMUST00000206460 279 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Gm23244-201ENSMUST00000083375 92 ntBASIC1.64□□□□□ -2.15
Vti1aO89116 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Vti1aO89116 Gm23336-201ENSMUST00000117023 123 ntBASIC1.63□□□□□ -2.15
Vti1aO89116 Mir6962-201ENSMUST00000199512 63 ntBASIC1.63□□□□□ -2.15
Vti1aO89116 Gm43911-201ENSMUST00000203097 76 ntBASIC1.63□□□□□ -2.15
Vti1aO89116 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.63□□□□□ -2.15
Vti1aO89116 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Vti1aO89116 Gm26253-201ENSMUST00000122493 103 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 Gm24650-201ENSMUST00000157105 103 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 Gm22503-201ENSMUST00000158983 115 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 Gm22801-201ENSMUST00000175624 84 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.62□□□□□ -2.15
Vti1aO89116 Gm25899-201ENSMUST00000082672 141 ntBASIC1.62□□□□□ -2.15
Vti1aO89116 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.61□□□□□ -2.15
Vti1aO89116 Gm26082-201ENSMUST00000104070 127 ntBASIC1.61□□□□□ -2.15
Vti1aO89116 Gm26224-201ENSMUST00000082506 80 ntBASIC1.61□□□□□ -2.15
Vti1aO89116 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.6□□□□□ -2.15
Vti1aO89116 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.6□□□□□ -2.15
Vti1aO89116 Gm27265-201ENSMUST00000183559 77 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms