Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm25274-201ENSMUST00000104296 135 ntBASIC0.85□□□□□ -2.27
ShdO88834 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.85□□□□□ -2.27
ShdO88834 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.85□□□□□ -2.27
ShdO88834 Gm44301-201ENSMUST00000200362 143 ntBASIC0.85□□□□□ -2.27
ShdO88834 Gm22753-201ENSMUST00000083657 107 ntBASIC0.85□□□□□ -2.27
ShdO88834 Gm23203-201ENSMUST00000104374 107 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm24246-201ENSMUST00000157315 132 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm26412-201ENSMUST00000157666 55 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm25901-201ENSMUST00000158494 130 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm17528-201ENSMUST00000171026 239 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm26398-201ENSMUST00000179015 127 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm44469-201ENSMUST00000198558 79 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm23301-201ENSMUST00000082713 65 ntBASIC0.84□□□□□ -2.27
ShdO88834 Gm22689-201ENSMUST00000102452 110 ntBASIC0.83□□□□□ -2.28
ShdO88834 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm11248-201ENSMUST00000119568 201 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm26091-201ENSMUST00000122704 82 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm22451-201ENSMUST00000122803 151 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm25060-201ENSMUST00000157374 130 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm24717-201ENSMUST00000157522 124 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
ShdO88834 Trbv25-201ENSMUST00000194700 273 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm45492-201ENSMUST00000211611 288 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm23239-201ENSMUST00000083006 181 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm25138-201ENSMUST00000083248 136 ntBASIC0.83□□□□□ -2.28
ShdO88834 Gm22786-201ENSMUST00000104086 122 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm23881-201ENSMUST00000116872 66 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm15289-201ENSMUST00000117793 244 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm22966-201ENSMUST00000157957 129 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm23416-201ENSMUST00000175520 95 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm22565-201ENSMUST00000175540 69 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm44488-201ENSMUST00000199467 119 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm44470-201ENSMUST00000203913 142 ntBASIC0.82□□□□□ -2.28
ShdO88834 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.82□□□□□ -2.28
ShdO88834 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.82□□□□□ -2.28
ShdO88834 Mir200b-201ENSMUST00000083615 70 ntBASIC0.82□□□□□ -2.28
ShdO88834 Gm22681-201ENSMUST00000083853 106 ntBASIC0.82□□□□□ -2.28
ShdO88834 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
ShdO88834 Gm20386-201ENSMUST00000174010 132 ntBASIC0.81□□□□□ -2.28
ShdO88834 Gm22286-201ENSMUST00000179708 107 ntBASIC0.81□□□□□ -2.28
ShdO88834 Gm24579-201ENSMUST00000103964 144 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm25378-201ENSMUST00000104333 129 ntBASIC0.8□□□□□ -2.28
ShdO88834 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm23260-201ENSMUST00000158317 172 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm10548-202ENSMUST00000165672 272 ntBASIC0.8□□□□□ -2.28
ShdO88834 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.8□□□□□ -2.28
ShdO88834 Mir6394-201ENSMUST00000184738 99 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm44211-201ENSMUST00000204867 145 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm20734-201ENSMUST00000216939 193 ntBASIC0.8□□□□□ -2.28
ShdO88834 Gm23651-201ENSMUST00000116755 120 ntBASIC0.79□□□□□ -2.28
ShdO88834 Gm23989-201ENSMUST00000117030 66 ntBASIC0.79□□□□□ -2.28
ShdO88834 Gm6985-201ENSMUST00000121255 271 ntBASIC0.79□□□□□ -2.28
ShdO88834 Gm26291-201ENSMUST00000158889 137 ntBASIC0.79□□□□□ -2.28
ShdO88834 Mir6985-201ENSMUST00000184641 61 ntBASIC0.79□□□□□ -2.28
ShdO88834 Gm28435-201ENSMUST00000185496 108 ntBASIC0.79□□□□□ -2.28
ShdO88834 Gm22544-201ENSMUST00000104349 127 ntBASIC0.78□□□□□ -2.28
ShdO88834 Mir1191-201ENSMUST00000116883 120 ntBASIC0.78□□□□□ -2.28
ShdO88834 Gm22775-201ENSMUST00000177630 120 ntBASIC0.78□□□□□ -2.28
ShdO88834 Gm26337-201ENSMUST00000178000 79 ntBASIC0.78□□□□□ -2.28
ShdO88834 Gm23569-201ENSMUST00000180120 120 ntBASIC0.78□□□□□ -2.28
ShdO88834 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.78□□□□□ -2.28
ShdO88834 Mir344-201ENSMUST00000083634 95 ntBASIC0.78□□□□□ -2.28
ShdO88834 Snord33-201ENSMUST00000083694 84 ntBASIC0.78□□□□□ -2.28
ShdO88834 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
ShdO88834 Gm12469-201ENSMUST00000117623 207 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm25367-201ENSMUST00000158846 106 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm26158-201ENSMUST00000158973 119 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm42506-201ENSMUST00000202009 150 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm44859-201ENSMUST00000207831 94 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm23735-201ENSMUST00000082551 134 ntBASIC0.77□□□□□ -2.29
ShdO88834 Gm22349-201ENSMUST00000157864 107 ntBASIC0.76□□□□□ -2.29
ShdO88834 Gm24223-201ENSMUST00000158827 90 ntBASIC0.76□□□□□ -2.29
ShdO88834 Traj61-201ENSMUST00000165025 72 ntBASIC0.76□□□□□ -2.29
ShdO88834 Gm25300-201ENSMUST00000175284 84 ntBASIC0.76□□□□□ -2.29
ShdO88834 Gm26290-201ENSMUST00000158891 145 ntBASIC0.75□□□□□ -2.29
ShdO88834 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.75□□□□□ -2.29
ShdO88834 Mir7010-201ENSMUST00000183464 63 ntBASIC0.75□□□□□ -2.29
ShdO88834 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.75□□□□□ -2.29
ShdO88834 Gm25629-201ENSMUST00000084001 107 ntBASIC0.75□□□□□ -2.29
ShdO88834 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm24342-201ENSMUST00000103907 104 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm23578-201ENSMUST00000103943 104 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm23917-201ENSMUST00000175256 98 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm44458-201ENSMUST00000196594 143 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm10351-201ENSMUST00000087694 125 ntBASIC0.74□□□□□ -2.29
ShdO88834 Gm25071-201ENSMUST00000175232 70 ntBASIC0.73□□□□□ -2.29
ShdO88834 Mir100-201ENSMUST00000175270 80 ntBASIC0.73□□□□□ -2.29
ShdO88834 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ShdO88834 Gm25091-201ENSMUST00000103997 71 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm22541-201ENSMUST00000158165 127 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm23857-201ENSMUST00000158379 111 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm23922-201ENSMUST00000178792 79 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm24657-201ENSMUST00000180085 79 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm22996-201ENSMUST00000180236 79 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm38113-201ENSMUST00000193704 201 ntBASIC0.72□□□□□ -2.29
ShdO88834 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.72□□□□□ -2.29
ShdO88834 Gm24129-201ENSMUST00000158537 97 ntBASIC0.71□□□□□ -2.3
ShdO88834 Mir3109-201ENSMUST00000175301 88 ntBASIC0.71□□□□□ -2.3
ShdO88834 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.71□□□□□ -2.3
ShdO88834 Mir6389-201ENSMUST00000183661 102 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 180.5 ms