Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm24549-201ENSMUST00000158647 139 ntBASIC0.81□□□□□ -2.28
Clk3O35492 Gm42935-201ENSMUST00000202004 151 ntBASIC0.81□□□□□ -2.28
Clk3O35492 Gm22753-201ENSMUST00000083657 107 ntBASIC0.81□□□□□ -2.28
Clk3O35492 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.81□□□□□ -2.28
Clk3O35492 Mir1899-201ENSMUST00000122798 96 ntBASIC0.8□□□□□ -2.28
Clk3O35492 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.8□□□□□ -2.28
Clk3O35492 Gm38113-201ENSMUST00000193704 201 ntBASIC0.8□□□□□ -2.28
Clk3O35492 Gm36956-201ENSMUST00000193830 214 ntBASIC0.8□□□□□ -2.28
Clk3O35492 Gm26338-201ENSMUST00000102372 110 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Gm22966-201ENSMUST00000157957 129 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Gm44470-201ENSMUST00000203913 142 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Gm23140-201ENSMUST00000082487 107 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Snord60-201ENSMUST00000082834 78 ntBASIC0.79□□□□□ -2.28
Clk3O35492 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Clk3O35492 Gm25901-201ENSMUST00000158494 130 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Gm25715-201ENSMUST00000158627 125 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Gm27587-201ENSMUST00000185116 163 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Gm44488-201ENSMUST00000199467 119 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Gm45492-201ENSMUST00000211611 288 ntBASIC0.78□□□□□ -2.28
Clk3O35492 Gm23260-201ENSMUST00000158317 172 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm24678-201ENSMUST00000158756 104 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Mir669j-201ENSMUST00000179023 121 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Mir6364-201ENSMUST00000183396 86 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Mir7663-201ENSMUST00000183950 61 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm27993-201ENSMUST00000184362 85 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm25814-201ENSMUST00000082754 107 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm23239-201ENSMUST00000083006 181 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm23678-201ENSMUST00000083157 107 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm25138-201ENSMUST00000083248 136 ntBASIC0.77□□□□□ -2.29
Clk3O35492 Gm23881-201ENSMUST00000116872 66 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm15289-201ENSMUST00000117793 244 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm24717-201ENSMUST00000157522 124 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm22349-201ENSMUST00000157864 107 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm26291-201ENSMUST00000158889 137 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm25071-201ENSMUST00000175232 70 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm23416-201ENSMUST00000175520 95 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm22775-201ENSMUST00000177630 120 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm23569-201ENSMUST00000180120 120 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Trbv25-201ENSMUST00000194700 273 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.76□□□□□ -2.29
Clk3O35492 Gm44211-201ENSMUST00000204867 145 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm44859-201ENSMUST00000207831 94 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm22681-201ENSMUST00000083853 106 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Mir362-201ENSMUST00000093592 65 ntBASIC0.76□□□□□ -2.29
Clk3O35492 Gm22469-201ENSMUST00000104118 133 ntBASIC0.75□□□□□ -2.29
Clk3O35492 Gm11248-201ENSMUST00000119568 201 ntBASIC0.75□□□□□ -2.29
Clk3O35492 Gm26337-201ENSMUST00000178000 79 ntBASIC0.75□□□□□ -2.29
Clk3O35492 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.75□□□□□ -2.29
Clk3O35492 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.75□□□□□ -2.29
Clk3O35492 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Clk3O35492 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Clk3O35492 Gm25506-201ENSMUST00000104339 70 ntBASIC0.74□□□□□ -2.29
Clk3O35492 Gm37330-201ENSMUST00000192606 153 ntBASIC0.74□□□□□ -2.29
Clk3O35492 Mir10b-201ENSMUST00000083566 68 ntBASIC0.74□□□□□ -2.29
Clk3O35492 Gm23203-201ENSMUST00000104374 107 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Mir1191-201ENSMUST00000116883 120 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm23991-201ENSMUST00000117033 93 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm22451-201ENSMUST00000122803 151 ntBASIC0.73□□□□□ -2.29
Clk3O35492 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.73□□□□□ -2.29
Clk3O35492 Gm25367-201ENSMUST00000158846 106 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm10548-202ENSMUST00000165672 272 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm28435-201ENSMUST00000185496 108 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm44469-201ENSMUST00000198558 79 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm23301-201ENSMUST00000082713 65 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Snord33-201ENSMUST00000083694 84 ntBASIC0.73□□□□□ -2.29
Clk3O35492 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm23651-201ENSMUST00000116755 120 ntBASIC0.72□□□□□ -2.29
Clk3O35492 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm23922-201ENSMUST00000178792 79 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm26398-201ENSMUST00000179015 127 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm24657-201ENSMUST00000180085 79 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm22996-201ENSMUST00000180236 79 ntBASIC0.72□□□□□ -2.29
Clk3O35492 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.72□□□□□ -2.29
Clk3O35492 Gm23989-201ENSMUST00000117030 66 ntBASIC0.71□□□□□ -2.3
Clk3O35492 Gm12469-201ENSMUST00000117623 207 ntBASIC0.71□□□□□ -2.3
Clk3O35492 Gm23350-201ENSMUST00000158429 103 ntBASIC0.71□□□□□ -2.3
Clk3O35492 Traj61-201ENSMUST00000165025 72 ntBASIC0.71□□□□□ -2.3
Clk3O35492 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.71□□□□□ -2.3
Clk3O35492 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.71□□□□□ -2.3
Clk3O35492 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Clk3O35492 Gm25378-201ENSMUST00000104333 129 ntBASIC0.7□□□□□ -2.3
Clk3O35492 Gm24223-201ENSMUST00000158827 90 ntBASIC0.7□□□□□ -2.3
Clk3O35492 Gm26158-201ENSMUST00000158973 119 ntBASIC0.7□□□□□ -2.3
Clk3O35492 Gm10351-201ENSMUST00000087694 125 ntBASIC0.7□□□□□ -2.3
Clk3O35492 Gm25091-201ENSMUST00000103997 71 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 258.4 ms