Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.02□□□□□ -2.41
Scn3aA2ASI5 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Snora75-201ENSMUST00000082903 133 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm26156-201ENSMUST00000116999 123 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.03□□□□□ -2.41
Scn3aA2ASI5 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Scn3aA2ASI5 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.05□□□□□ -2.42
Scn3aA2ASI5 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.06□□□□□ -2.42
Scn3aA2ASI5 Gm22989-201ENSMUST00000158313 86 ntBASIC-0.06□□□□□ -2.42
Scn3aA2ASI5 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.06□□□□□ -2.42
Scn3aA2ASI5 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.06□□□□□ -2.42
Scn3aA2ASI5 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.06□□□□□ -2.42
Scn3aA2ASI5 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm44909-201ENSMUST00000208756 165 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.07□□□□□ -2.42
Scn3aA2ASI5 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.08□□□□□ -2.42
Scn3aA2ASI5 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.08□□□□□ -2.42
Scn3aA2ASI5 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.08□□□□□ -2.42
Scn3aA2ASI5 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.08□□□□□ -2.42
Scn3aA2ASI5 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.08□□□□□ -2.42
Scn3aA2ASI5 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm22373-201ENSMUST00000104584 89 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Mir672-201ENSMUST00000102331 100 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Mir669g-201ENSMUST00000116809 123 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.09□□□□□ -2.42
Scn3aA2ASI5 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Scn3aA2ASI5 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.1□□□□□ -2.43
Scn3aA2ASI5 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.1□□□□□ -2.43
Scn3aA2ASI5 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.1□□□□□ -2.43
Scn3aA2ASI5 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.1□□□□□ -2.43
Scn3aA2ASI5 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.11□□□□□ -2.43
Scn3aA2ASI5 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.11□□□□□ -2.43
Scn3aA2ASI5 Mir471-201ENSMUST00000093596 67 ntBASIC-0.11□□□□□ -2.43
Scn3aA2ASI5 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.11□□□□□ -2.43
Scn3aA2ASI5 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.11□□□□□ -2.43
Scn3aA2ASI5 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.12□□□□□ -2.43
Scn3aA2ASI5 Mir18-201ENSMUST00000083469 96 ntBASIC-0.12□□□□□ -2.43
Scn3aA2ASI5 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.13□□□□□ -2.43
Scn3aA2ASI5 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.14□□□□□ -2.43
Scn3aA2ASI5 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.14□□□□□ -2.43
Scn3aA2ASI5 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.14□□□□□ -2.43
Scn3aA2ASI5 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.14□□□□□ -2.43
Scn3aA2ASI5 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Scn3aA2ASI5 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Gm27465-201ENSMUST00000184290 91 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.15□□□□□ -2.43
Scn3aA2ASI5 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Mir191-201ENSMUST00000196210 74 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.16□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 197.6 ms