Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Ggps1Q9WTN0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.56□□□□□ -2.32
Ggps1Q9WTN0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.56□□□□□ -2.32
Ggps1Q9WTN0 Mir6369-201ENSMUST00000183772 106 ntBASIC0.56□□□□□ -2.32
Ggps1Q9WTN0 Gm22753-201ENSMUST00000083657 107 ntBASIC0.56□□□□□ -2.32
Ggps1Q9WTN0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm27934-201ENSMUST00000158795 63 ntBASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm22259-201ENSMUST00000178926 107 ntBASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm23423-201ENSMUST00000082782 106 ntBASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm24030-201ENSMUST00000083931 164 ntBASIC0.55□□□□□ -2.32
Ggps1Q9WTN0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.54□□□□□ -2.32
Ggps1Q9WTN0 Gm25315-201ENSMUST00000116823 121 ntBASIC0.54□□□□□ -2.32
Ggps1Q9WTN0 Gm24238-201ENSMUST00000157792 98 ntBASIC0.54□□□□□ -2.32
Ggps1Q9WTN0 Gm26204-201ENSMUST00000082906 107 ntBASIC0.54□□□□□ -2.32
Ggps1Q9WTN0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ggps1Q9WTN0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.53□□□□□ -2.32
Ggps1Q9WTN0 Gm43381-201ENSMUST00000198553 165 ntBASIC0.53□□□□□ -2.32
Ggps1Q9WTN0 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Ggps1Q9WTN0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Scarna9-201ENSMUST00000104318 70 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Gm15654-201ENSMUST00000152660 300 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Gm25633-201ENSMUST00000178565 107 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Gm44807-201ENSMUST00000206115 154 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Mir488-201ENSMUST00000093595 109 ntBASIC0.52□□□□□ -2.33
Ggps1Q9WTN0 Gm25610-201ENSMUST00000104016 129 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 Mir1899-201ENSMUST00000122798 96 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 Mir30f-201ENSMUST00000196073 92 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.51□□□□□ -2.33
Ggps1Q9WTN0 Gm25300-201ENSMUST00000175284 84 ntBASIC0.5□□□□□ -2.33
Ggps1Q9WTN0 Gm27993-201ENSMUST00000184362 85 ntBASIC0.5□□□□□ -2.33
Ggps1Q9WTN0 Snord80-202ENSMUST00000199023 77 ntBASIC0.5□□□□□ -2.33
Ggps1Q9WTN0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.5□□□□□ -2.33
Ggps1Q9WTN0 Mir471-201ENSMUST00000093596 67 ntBASIC0.5□□□□□ -2.33
Ggps1Q9WTN0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.49□□□□□ -2.33
Ggps1Q9WTN0 Gm37330-201ENSMUST00000192606 153 ntBASIC0.49□□□□□ -2.33
Ggps1Q9WTN0 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.49□□□□□ -2.33
Ggps1Q9WTN0 Snord60-201ENSMUST00000082834 78 ntBASIC0.49□□□□□ -2.33
Ggps1Q9WTN0 Gm10172-201ENSMUST00000085929 558 ntBASIC0.49□□□□□ -2.33
Ggps1Q9WTN0 Gm23859-201ENSMUST00000158383 64 ntBASIC0.48□□□□□ -2.33
Ggps1Q9WTN0 Gm20409-201ENSMUST00000173457 130 ntBASIC0.48□□□□□ -2.33
Ggps1Q9WTN0 Gm24575-201ENSMUST00000175502 77 ntBASIC0.48□□□□□ -2.33
Ggps1Q9WTN0 Mir7010-201ENSMUST00000183464 63 ntBASIC0.48□□□□□ -2.33
Ggps1Q9WTN0 Gm23461-201ENSMUST00000083265 107 ntBASIC0.48□□□□□ -2.33
Ggps1Q9WTN0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm24555-201ENSMUST00000104548 124 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm14502-201ENSMUST00000118154 113 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.47□□□□□ -2.33
Ggps1Q9WTN0 Gm14626-201ENSMUST00000117619 216 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 Gm22989-201ENSMUST00000158313 86 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 Gm27446-201ENSMUST00000183963 89 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 Gm44922-201ENSMUST00000206690 90 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 Gm23301-201ENSMUST00000082713 65 ntBASIC0.46□□□□□ -2.34
Ggps1Q9WTN0 Gm24232-201ENSMUST00000104314 132 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm23881-201ENSMUST00000116872 66 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm25653-201ENSMUST00000158473 138 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm25161-201ENSMUST00000158913 132 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Mir100-201ENSMUST00000175270 80 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm37624-201ENSMUST00000193751 219 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Mir3969-201ENSMUST00000197106 92 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm42623-201ENSMUST00000197225 379 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Gm5002-201ENSMUST00000207145 223 ntBASIC0.45□□□□□ -2.34
Ggps1Q9WTN0 Mir1197-201ENSMUST00000117037 120 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Gm10548-202ENSMUST00000165672 272 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Mir7657-201ENSMUST00000196051 57 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Gm44353-201ENSMUST00000200618 138 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.44□□□□□ -2.34
Ggps1Q9WTN0 Mir20b-201ENSMUST00000102087 80 ntBASIC0.43□□□□□ -2.34
Ggps1Q9WTN0 Mir1298-201ENSMUST00000116681 98 ntBASIC0.43□□□□□ -2.34
Ggps1Q9WTN0 Gm26403-201ENSMUST00000158500 105 ntBASIC0.43□□□□□ -2.34
Ggps1Q9WTN0 Gm25247-201ENSMUST00000175475 90 ntBASIC0.43□□□□□ -2.34
Ggps1Q9WTN0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.43□□□□□ -2.34
Ggps1Q9WTN0 Gm24590-201ENSMUST00000116699 119 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Gm23917-201ENSMUST00000175256 98 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Mir21b-201ENSMUST00000184317 108 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Snord61-201ENSMUST00000083176 71 ntBASIC0.42□□□□□ -2.34
Ggps1Q9WTN0 Gm26158-201ENSMUST00000158973 119 ntBASIC0.41□□□□□ -2.34
Ggps1Q9WTN0 Gm27694-201ENSMUST00000184740 86 ntBASIC0.41□□□□□ -2.34
Ggps1Q9WTN0 Gm44469-201ENSMUST00000198558 79 ntBASIC0.41□□□□□ -2.34
Ggps1Q9WTN0 Mir377-201ENSMUST00000083504 68 ntBASIC0.41□□□□□ -2.34
Ggps1Q9WTN0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Ggps1Q9WTN0 Gm22340-201ENSMUST00000157717 114 ntBASIC0.4□□□□□ -2.35
Ggps1Q9WTN0 Gm22348-201ENSMUST00000178674 79 ntBASIC0.4□□□□□ -2.35
Ggps1Q9WTN0 Gm18665-201ENSMUST00000189783 270 ntBASIC0.4□□□□□ -2.35
Ggps1Q9WTN0 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.4□□□□□ -2.35
Ggps1Q9WTN0 Gm45541-201ENSMUST00000210443 54 ntBASIC0.4□□□□□ -2.35
Ggps1Q9WTN0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Ggps1Q9WTN0 Gm27803-201ENSMUST00000183763 119 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms