Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC112972.1-201ENSMUST00000227329 365 ntBASIC-2.2□□□□□ -2.76
Scn11aQ9R053 Mir369-201ENSMUST00000083627 79 ntBASIC-2.2□□□□□ -2.76
Scn11aQ9R053 Gm13345-201ENSMUST00000121928 228 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm22720-201ENSMUST00000122710 87 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 CT009718.4-201ENSMUST00000221881 109 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm25930-201ENSMUST00000082785 107 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm24037-201ENSMUST00000082871 180 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm24522-201ENSMUST00000083964 108 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm24064-201ENSMUST00000157486 106 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm24238-201ENSMUST00000157792 98 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm23291-201ENSMUST00000175611 78 ntBASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-2.21□□□□□ -2.76
Scn11aQ9R053 Gm25056-201ENSMUST00000157372 62 ntBASIC-2.22□□□□□ -2.76
Scn11aQ9R053 Mir1839-201ENSMUST00000175366 127 ntBASIC-2.22□□□□□ -2.76
Scn11aQ9R053 Gm23093-201ENSMUST00000083450 102 ntBASIC-2.22□□□□□ -2.76
Scn11aQ9R053 Gm24847-201ENSMUST00000158032 108 ntBASIC-2.23□□□□□ -2.77
Scn11aQ9R053 Gm45403-201ENSMUST00000209453 276 ntBASIC-2.23□□□□□ -2.77
Scn11aQ9R053 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.23□□□□□ -2.77
Scn11aQ9R053 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.23□□□□□ -2.77
Scn11aQ9R053 Gm14533-201ENSMUST00000117088 93 ntBASIC-2.24□□□□□ -2.77
Scn11aQ9R053 Gm25329-201ENSMUST00000158041 126 ntBASIC-2.24□□□□□ -2.77
Scn11aQ9R053 Gm23571-201ENSMUST00000180073 127 ntBASIC-2.24□□□□□ -2.77
Scn11aQ9R053 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-2.24□□□□□ -2.77
Scn11aQ9R053 Gm14287-201ENSMUST00000121060 117 ntBASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm24577-201ENSMUST00000158580 63 ntBASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm24223-201ENSMUST00000158827 90 ntBASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-2.25□□□□□ -2.77
Scn11aQ9R053 Gm13801-201ENSMUST00000120750 160 ntBASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Gm25275-201ENSMUST00000104297 129 ntBASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Snord98-201ENSMUST00000116819 65 ntBASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Gm22539-201ENSMUST00000158167 117 ntBASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.26□□□□□ -2.77
Scn11aQ9R053 Gm23041-201ENSMUST00000083868 106 ntBASIC-2.27□□□□□ -2.77
Scn11aQ9R053 Gm22883-201ENSMUST00000157376 106 ntBASIC-2.28□□□□□ -2.77
Scn11aQ9R053 Gm28330-201ENSMUST00000190353 171 ntBASIC-2.28□□□□□ -2.77
Scn11aQ9R053 Gm22294-201ENSMUST00000083308 104 ntBASIC-2.28□□□□□ -2.77
Scn11aQ9R053 Gm25848-201ENSMUST00000116790 144 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm22479-201ENSMUST00000122566 81 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm24960-201ENSMUST00000157923 90 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm22572-201ENSMUST00000082985 105 ntBASIC-2.28□□□□□ -2.78
Scn11aQ9R053 Gm25313-201ENSMUST00000101817 116 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Mir669h-201ENSMUST00000116944 125 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm23411-201ENSMUST00000157988 62 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm22113-201ENSMUST00000158343 104 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm22851-201ENSMUST00000178741 94 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm25074-201ENSMUST00000178782 94 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm23287-201ENSMUST00000179427 116 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm23143-201ENSMUST00000180137 116 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm42935-201ENSMUST00000202004 151 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 AC124687.1-201ENSMUST00000221868 189 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 AC154506.3-201ENSMUST00000225417 213 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm24871-201ENSMUST00000083099 116 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Rnu5g-201ENSMUST00000093721 116 ntBASIC-2.29□□□□□ -2.78
Scn11aQ9R053 Gm25434-201ENSMUST00000158278 167 ntBASIC-2.3□□□□□ -2.78
Scn11aQ9R053 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.3□□□□□ -2.78
Scn11aQ9R053 AC116589.1-201ENSMUST00000220634 327 ntBASIC-2.3□□□□□ -2.78
Scn11aQ9R053 AC164117.2-201ENSMUST00000222090 327 ntBASIC-2.3□□□□□ -2.78
Scn11aQ9R053 AC156790.3-201ENSMUST00000226200 254 ntBASIC-2.3□□□□□ -2.78
Scn11aQ9R053 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm23379-201ENSMUST00000180026 107 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm44142-201ENSMUST00000203358 311 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm23451-201ENSMUST00000083328 122 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm25207-201ENSMUST00000093745 107 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm23640-201ENSMUST00000157860 104 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm38261-201ENSMUST00000192608 316 ntBASIC-2.31□□□□□ -2.78
Scn11aQ9R053 Gm24580-201ENSMUST00000103965 131 ntBASIC-2.32□□□□□ -2.78
Scn11aQ9R053 n-R5s94-201ENSMUST00000082573 119 ntBASIC-2.32□□□□□ -2.78
Scn11aQ9R053 Snord16a-201ENSMUST00000083895 99 ntBASIC-2.32□□□□□ -2.78
Scn11aQ9R053 Gm24275-201ENSMUST00000116780 146 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm26398-201ENSMUST00000179015 127 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Mir3969-201ENSMUST00000197106 92 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm23536-201ENSMUST00000157541 134 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm22612-201ENSMUST00000158293 101 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm20462-201ENSMUST00000172623 408 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm27784-201ENSMUST00000184926 113 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm26107-201ENSMUST00000083972 107 ntBASIC-2.33□□□□□ -2.78
Scn11aQ9R053 Gm25664-201ENSMUST00000157697 107 ntBASIC-2.34□□□□□ -2.78
Scn11aQ9R053 Gm42677-201ENSMUST00000196363 127 ntBASIC-2.34□□□□□ -2.78
Scn11aQ9R053 Gm24913-201ENSMUST00000157286 107 ntBASIC-2.35□□□□□ -2.79
Scn11aQ9R053 Gm23022-201ENSMUST00000158768 180 ntBASIC-2.35□□□□□ -2.79
Scn11aQ9R053 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.35□□□□□ -2.79
Scn11aQ9R053 Gm22638-201ENSMUST00000179674 107 ntBASIC-2.35□□□□□ -2.79
Scn11aQ9R053 Gm11694-201ENSMUST00000118637 159 ntBASIC-2.36□□□□□ -2.79
Scn11aQ9R053 Snord123-201ENSMUST00000158692 71 ntBASIC-2.36□□□□□ -2.79
Scn11aQ9R053 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-2.36□□□□□ -2.79
Scn11aQ9R053 Gm26478-201ENSMUST00000122611 133 ntBASIC-2.36□□□□□ -2.79
Scn11aQ9R053 Gm23148-201ENSMUST00000180367 107 ntBASIC-2.37□□□□□ -2.79
Scn11aQ9R053 Mir465d-201ENSMUST00000196314 58 ntBASIC-2.37□□□□□ -2.79
Scn11aQ9R053 AC120394.1-201ENSMUST00000217153 351 ntBASIC-2.37□□□□□ -2.79
Scn11aQ9R053 Gm22305-201ENSMUST00000082690 108 ntBASIC-2.37□□□□□ -2.79
Scn11aQ9R053 Gm25258-201ENSMUST00000083049 107 ntBASIC-2.37□□□□□ -2.79
Scn11aQ9R053 AC153526.1-201ENSMUST00000219750 190 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms