Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Mir216a-201ENSMUST00000083605 72 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm24232-201ENSMUST00000104314 132 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Gm23991-201ENSMUST00000117033 93 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Gm26097-201ENSMUST00000179642 93 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Gm27289-201ENSMUST00000183341 82 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Gm44807-201ENSMUST00000206115 154 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Gm5002-201ENSMUST00000207145 223 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Snord61-201ENSMUST00000083176 71 ntBASIC0.63□□□□□ -2.31
Cpsf3Q9QXK7 Scarna9-201ENSMUST00000104318 70 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm15654-201ENSMUST00000152660 300 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm22967-201ENSMUST00000157956 239 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm24549-201ENSMUST00000158647 139 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm16550-201ENSMUST00000162550 126 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm22466-201ENSMUST00000175278 69 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Gm26236-201ENSMUST00000175536 137 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Mir6985-201ENSMUST00000184641 61 ntBASIC0.62□□□□□ -2.31
Cpsf3Q9QXK7 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm13577-201ENSMUST00000121365 205 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm24238-201ENSMUST00000157792 98 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm23416-201ENSMUST00000175520 95 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm27792-201ENSMUST00000184031 115 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm18665-201ENSMUST00000189783 270 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm22753-201ENSMUST00000083657 107 ntBASIC0.61□□□□□ -2.31
Cpsf3Q9QXK7 Gm22606-201ENSMUST00000158290 103 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Gm24131-201ENSMUST00000158539 107 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Gm20409-201ENSMUST00000173457 130 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Gm24575-201ENSMUST00000175502 77 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Mir30f-201ENSMUST00000196073 92 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Gm43944-201ENSMUST00000205220 120 ntBASIC0.6□□□□□ -2.31
Cpsf3Q9QXK7 Mir1899-201ENSMUST00000122798 96 ntBASIC0.59□□□□□ -2.31
Cpsf3Q9QXK7 Gm22337-201ENSMUST00000157721 132 ntBASIC0.59□□□□□ -2.31
Cpsf3Q9QXK7 Gm27446-201ENSMUST00000183963 89 ntBASIC0.59□□□□□ -2.31
Cpsf3Q9QXK7 Gm22169-201ENSMUST00000083229 107 ntBASIC0.59□□□□□ -2.31
Cpsf3Q9QXK7 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.59□□□□□ -2.32
Cpsf3Q9QXK7 Gm25610-201ENSMUST00000104016 129 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm15289-201ENSMUST00000117793 244 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm14946-201ENSMUST00000119859 296 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm6985-201ENSMUST00000121255 271 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm25980-201ENSMUST00000157176 218 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm23605-201ENSMUST00000157255 127 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm22522-201ENSMUST00000158271 151 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Mir3969-201ENSMUST00000197106 92 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm44338-201ENSMUST00000198614 110 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Snord47-201ENSMUST00000083034 77 ntBASIC0.58□□□□□ -2.32
Cpsf3Q9QXK7 Gm24054-201ENSMUST00000158619 105 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Mir6389-201ENSMUST00000183661 102 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Gm26225-201ENSMUST00000082508 135 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Gm25814-201ENSMUST00000082754 107 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Gm24258-201ENSMUST00000083739 133 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.57□□□□□ -2.32
Cpsf3Q9QXK7 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm25943-201ENSMUST00000103791 90 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm23989-201ENSMUST00000117030 66 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm25285-201ENSMUST00000178951 90 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Mir7657-201ENSMUST00000196051 57 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm23303-201ENSMUST00000082714 152 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Snord60-201ENSMUST00000082834 78 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm25136-201ENSMUST00000083253 115 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm10172-201ENSMUST00000085929 558 ntBASIC0.56□□□□□ -2.32
Cpsf3Q9QXK7 Gm44489-201ENSMUST00000104619 97 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Gm22105-201ENSMUST00000116734 116 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Gm22139-201ENSMUST00000158747 105 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Mir7116-201ENSMUST00000195956 70 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Gm22302-201ENSMUST00000082657 106 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Gm25410-201ENSMUST00000083758 137 ntBASIC0.55□□□□□ -2.32
Cpsf3Q9QXK7 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Gm23320-201ENSMUST00000104462 127 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Gm14626-201ENSMUST00000117619 216 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Gm26484-201ENSMUST00000158018 106 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Mir3094-201ENSMUST00000175121 64 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Mir8116-201ENSMUST00000184134 97 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Mir344-201ENSMUST00000083634 95 ntBASIC0.54□□□□□ -2.32
Cpsf3Q9QXK7 Gm23881-201ENSMUST00000116872 66 ntBASIC0.53□□□□□ -2.32
Cpsf3Q9QXK7 Gm23990-201ENSMUST00000117031 117 ntBASIC0.53□□□□□ -2.32
Cpsf3Q9QXK7 Gm25599-201ENSMUST00000157816 103 ntBASIC0.53□□□□□ -2.32
Cpsf3Q9QXK7 Gm25716-201ENSMUST00000158628 104 ntBASIC0.53□□□□□ -2.32
Cpsf3Q9QXK7 Gm22699-201ENSMUST00000175376 105 ntBASIC0.53□□□□□ -2.32
Cpsf3Q9QXK7 Gm11644-201ENSMUST00000119735 150 ntBASIC0.52□□□□□ -2.33
Cpsf3Q9QXK7 Gm24963-201ENSMUST00000157916 144 ntBASIC0.52□□□□□ -2.33
Cpsf3Q9QXK7 Gm25329-201ENSMUST00000158041 126 ntBASIC0.52□□□□□ -2.33
Cpsf3Q9QXK7 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.52□□□□□ -2.33
Cpsf3Q9QXK7 Gm23445-201ENSMUST00000082800 107 ntBASIC0.52□□□□□ -2.33
Cpsf3Q9QXK7 Gm24342-201ENSMUST00000103907 104 ntBASIC0.51□□□□□ -2.33
Cpsf3Q9QXK7 Gm14884-201ENSMUST00000120456 196 ntBASIC0.51□□□□□ -2.33
Cpsf3Q9QXK7 Mir1966-201ENSMUST00000158807 108 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms