Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm22365-201ENSMUST00000093750 117 ntBASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Snord100-201ENSMUST00000116836 74 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.99□□□□□ -2.57
Trem3Q9JKE1 Gm24867-201ENSMUST00000104161 107 ntBASIC-1□□□□□ -2.57
Trem3Q9JKE1 Gm27723-201ENSMUST00000157398 63 ntBASIC-1□□□□□ -2.57
Trem3Q9JKE1 n-R5s96-201ENSMUST00000082574 124 ntBASIC-1□□□□□ -2.57
Trem3Q9JKE1 Gm23347-201ENSMUST00000083823 82 ntBASIC-1□□□□□ -2.57
Trem3Q9JKE1 Gm25364-201ENSMUST00000158851 107 ntBASIC-1.01□□□□□ -2.57
Trem3Q9JKE1 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.01□□□□□ -2.57
Trem3Q9JKE1 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.01□□□□□ -2.57
Trem3Q9JKE1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.01□□□□□ -2.57
Trem3Q9JKE1 Gm26420-201ENSMUST00000104273 103 ntBASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
Trem3Q9JKE1 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.03□□□□□ -2.57
Trem3Q9JKE1 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.03□□□□□ -2.57
Trem3Q9JKE1 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm25970-201ENSMUST00000157165 86 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm24393-201ENSMUST00000158135 97 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Snord42a-201ENSMUST00000082606 65 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.04□□□□□ -2.58
Trem3Q9JKE1 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm24192-201ENSMUST00000157978 145 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm23567-201ENSMUST00000178005 107 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Mir6928-201ENSMUST00000185166 70 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm44149-201ENSMUST00000204256 226 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 CT025603.4-201ENSMUST00000225777 413 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.05□□□□□ -2.58
Trem3Q9JKE1 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.06□□□□□ -2.58
Trem3Q9JKE1 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Trem3Q9JKE1 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.06□□□□□ -2.58
Trem3Q9JKE1 Gm29665-201ENSMUST00000191457 528 ntBASIC-1.06□□□□□ -2.58
Trem3Q9JKE1 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.07□□□□□ -2.58
Trem3Q9JKE1 Gm43976-201ENSMUST00000203637 235 ntBASIC-1.07□□□□□ -2.58
Trem3Q9JKE1 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.07□□□□□ -2.58
Trem3Q9JKE1 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.07□□□□□ -2.58
Trem3Q9JKE1 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.07□□□□□ -2.58
Trem3Q9JKE1 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.08□□□□□ -2.58
Trem3Q9JKE1 Mir96-201ENSMUST00000083652 106 ntBASIC-1.08□□□□□ -2.58
Trem3Q9JKE1 Gm26421-201ENSMUST00000104279 132 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.09□□□□□ -2.58
Trem3Q9JKE1 Gm22079-201ENSMUST00000157592 106 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm29512-201ENSMUST00000185544 315 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm25793-201ENSMUST00000083287 107 ntBASIC-1.1□□□□□ -2.59
Trem3Q9JKE1 Gm22790-201ENSMUST00000157229 129 ntBASIC-1.11□□□□□ -2.59
Trem3Q9JKE1 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.11□□□□□ -2.59
Trem3Q9JKE1 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.11□□□□□ -2.59
Trem3Q9JKE1 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.11□□□□□ -2.59
Trem3Q9JKE1 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Gm26160-201ENSMUST00000158965 63 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Mir3969-201ENSMUST00000197106 92 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Gm44490-201ENSMUST00000198566 127 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.12□□□□□ -2.59
Trem3Q9JKE1 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm24392-201ENSMUST00000158136 103 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm23022-201ENSMUST00000158768 180 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm24667-201ENSMUST00000158938 103 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm24035-201ENSMUST00000082867 107 ntBASIC-1.13□□□□□ -2.59
Trem3Q9JKE1 Gm22784-201ENSMUST00000104088 132 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Gm42935-201ENSMUST00000202004 151 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 AL935138.1-201ENSMUST00000215309 196 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.14□□□□□ -2.59
Trem3Q9JKE1 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Snord67-201ENSMUST00000104033 111 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.15□□□□□ -2.59
Trem3Q9JKE1 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms